Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC009812.2-201ENST00000517657 457 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 EEF1B2P4-201ENST00000551398 348 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AL391156.1-201ENST00000554965 554 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 H3F3AP1-201ENST00000559984 334 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC010738.1-201ENST00000604970 987 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC055876.5-201ENST00000605667 259 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 Z99129.2-201ENST00000619967 314 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC109454.4-201ENST00000623411 649 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 MIR6733-201ENST00000635723 61 ntBASIC2.78□□□□□ -1.96
COL21A1Q96P44 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.78□□□□□ -1.96
COL21A1Q96P44 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 RNU6-582P-201ENST00000362989 107 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 Y_RNA.110-201ENST00000363220 99 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 RPS3AP26-201ENST00000398259 784 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 CYCSP45-201ENST00000402289 315 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 MTCYBP15-201ENST00000433123 1127 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 HIGD1AP11-201ENST00000438361 280 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC127537.2-201ENST00000439258 465 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 MTCYBP34-201ENST00000439552 670 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC000041.1-201ENST00000439655 175 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 GSTA11P-201ENST00000452866 669 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC093767.1-201ENST00000504523 156 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 RNA5SP341-201ENST00000516261 117 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 MTCO3P13-201ENST00000577757 781 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 MIR4325-201ENST00000583049 90 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC006504.3-201ENST00000586818 523 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AL133393.1-201ENST00000603277 287 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AP003973.1-201ENST00000604639 691 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC107871.2-201ENST00000612894 502 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 AC068880.4-201ENST00000623082 495 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL21A1Q96P44 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL21A1Q96P44 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL21A1Q96P44 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 AL035425.3-201ENST00000564206 4996 ntBASIC2.77□□□□□ -1.97
COL21A1Q96P44 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
COL21A1Q96P44 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC090740.1-201ENST00000623193 2262 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 SGO1P2-201ENST00000429458 1589 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 HMGB1P5-201ENST00000255320 642 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 RNU6-236P-201ENST00000363886 106 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 SNORD82-201ENST00000365530 70 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 SNORA51.6-201ENST00000384151 125 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 RPL22P22-201ENST00000395439 379 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AL355615.1-201ENST00000406187 641 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 RNU6-712P-201ENST00000410558 100 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 FCF1P2-201ENST00000415284 583 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 RPL7P10-201ENST00000417407 739 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC022018.1-201ENST00000430685 241 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 SNRPEP4-201ENST00000435815 279 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 COX6CP2-201ENST00000444980 225 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 MTCO1P48-201ENST00000448024 1096 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC117440.1-201ENST00000474107 571 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms