Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 HIGD1AP1-201ENST00000550979 275 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 MTATP6P24-201ENST00000576835 677 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 MIR5186-201ENST00000577504 120 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 MIR4276-201ENST00000584832 70 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 MIR3922-201ENST00000585192 84 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 AP001269.3-201ENST00000588718 329 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 CCDC58P3-201ENST00000590792 430 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC073657.2-201ENST00000605661 303 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 U1.23-201ENST00000610293 146 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 RNU1-68P-201ENST00000615382 146 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AL138880.2-201ENST00000616214 239 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC231759.1-201ENST00000616455 597 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC013470.4-201ENST00000619978 986 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 U1.39-201ENST00000621562 146 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 AC008993.2-201ENST00000631744 806 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AL034408.1-202ENST00000636088 415 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 GABRG2-229ENST00000641017 3628 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC00477Q96M19 AP002907.1-201ENST00000606361 1430 ntBASIC2.42□□□□□ -2.02
LINC00477Q96M19 AL161431.1-201ENST00000618966 4205 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LINC00477Q96M19 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 U3.6-201ENST00000363622 211 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 RNU1-85P-201ENST00000364127 164 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
LINC00477Q96M19 MIR554-201ENST00000384874 96 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 MT-TC-201ENST00000387405 66 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 FABP12P1-201ENST00000401911 322 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 MTND4P13-201ENST00000402078 1023 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 RN7SKP123-201ENST00000410732 291 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 HMGN1P24-201ENST00000412282 298 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 RPS7P15-201ENST00000415804 584 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 Z75741.2-201ENST00000417272 1167 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 FNDC3CP-201ENST00000420795 1155 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 MTCO3P1-205ENST00000422088 832 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 RPF2P1-201ENST00000424137 906 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC006548.1-201ENST00000427470 102 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 USP9YP24-201ENST00000434374 697 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 YWHAZP7-201ENST00000436906 631 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC122718.1-201ENST00000439448 744 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 RPL23AP58-201ENST00000440453 469 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 USP9YP17-201ENST00000444617 696 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 PTENP1-201ENST00000447117 1215 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 CYCSP35-201ENST00000451978 304 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 ELOCP23-201ENST00000452014 332 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 TRGVB-201ENST00000453257 471 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 RN7SL542P-201ENST00000467147 294 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 PABPC1P3-201ENST00000469174 459 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 RN7SL283P-201ENST00000489055 303 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC093278.1-201ENST00000494700 600 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 ARL4AP2-201ENST00000507378 601 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 MTCYBP16-201ENST00000509187 1129 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC112673.1-201ENST00000513168 575 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 SCARNA20.6-201ENST00000517251 106 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC092470.1-201ENST00000546187 132 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 SETP2-201ENST00000553886 926 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 GTF2IP8-201ENST00000560687 584 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AL132657.2-201ENST00000564417 358 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms