Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC068587.5-201ENST00000528506 175 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC009962.1-201ENST00000567327 3813 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 MIR548Y-201ENST00000582739 110 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC011494.1-201ENST00000596454 237 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC073410.2-201ENST00000603240 332 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC011921.3-201ENST00000605540 361 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC103705.1-201ENST00000619013 241 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AP000346.3-201ENST00000622821 210 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AL450472.1-202ENST00000637286 180 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 CCT8P1-201ENST00000413611 1657 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 GVINP1-202ENST00000531871 7271 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 AC018809.2-201ENST00000602436 3823 ntBASIC6.28□□□□□ -1.4
TRIM47Q96LD4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM47Q96LD4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AL391987.6-201ENST00000305671 199 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 IGKV7-3-201ENST00000357453 298 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 RNU6-153P-201ENST00000364422 104 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 RNU6-1078P-201ENST00000364522 103 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 RNVU1-6-201ENST00000364688 164 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 RNU6-959P-201ENST00000384671 107 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 SNORA41-201ENST00000384675 132 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 Z99755.1-201ENST00000414048 380 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 NDUFB4P10-201ENST00000452541 359 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AL136097.1-201ENST00000456945 913 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AC008716.1-201ENST00000511084 513 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AC097486.1-201ENST00000515331 210 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 SNORA31.18-201ENST00000517043 134 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 MTND5P41-201ENST00000517498 206 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 DEFB109D-201ENST00000529497 240 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AC024405.2-202ENST00000532731 184 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 SUB1P3-201ENST00000564581 315 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AC005899.2-201ENST00000584353 90 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AC002044.1-201ENST00000606707 158 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 Z95327.2-201ENST00000414579 1873 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AL391684.1-202ENST00000641293 1636 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 AC008669.1-201ENST00000565823 2178 ntBASIC6.27□□□□□ -1.41
TRIM47Q96LD4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM47Q96LD4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 MIR411-201ENST00000362239 96 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 Y_RNA.105-201ENST00000363182 111 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 RNU6-343P-201ENST00000364709 104 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 RNU6-215P-201ENST00000365169 102 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 RNU6-1168P-201ENST00000390831 104 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 RNA5SP487-201ENST00000410186 122 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 RN7SKP126-201ENST00000411143 300 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 RPL21P112-201ENST00000434403 463 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 REG1CP-206ENST00000447469 496 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AL935212.3-201ENST00000450729 284 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 SNORD5.1-201ENST00000458800 75 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 SNORD125-201ENST00000459538 96 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 RN7SL197P-201ENST00000466981 299 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC104472.2-201ENST00000469035 601 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 RPL21P93-201ENST00000480465 489 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC004980.4-201ENST00000513375 203 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 RAB9BP1-201ENST00000519581 626 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 CBX3P8-201ENST00000532412 525 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 CYCSP28-201ENST00000534284 321 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC063949.1-201ENST00000552900 865 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms