Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTP4Q96DX8 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RTP4Q96DX8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTP4Q96DX8 MIR23A-201ENST00000385245 73 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC073264.1-201ENST00000411508 416 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 HMGB3P20-201ENST00000417997 600 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 MRPS10P2-201ENST00000431226 381 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 DNAJC19P4-201ENST00000440115 345 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTP4Q96DX8 RPS29P31-201ENST00000446147 164 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 RPL39P6-201ENST00000448289 150 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 RPL7P31-201ENST00000450192 724 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 KLF3P2-201ENST00000465138 268 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 RNU6-488P-201ENST00000515918 99 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 NRON-201ENST00000517270 370 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC013828.2-201ENST00000532487 235 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AP002453.2-201ENST00000533503 320 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC068446.3-201ENST00000555285 382 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC136619.2-201ENST00000563361 631 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 TPRKBP2-201ENST00000565969 475 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC087499.8-201ENST00000578406 226 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 OR4G1P-201ENST00000588632 938 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC115621.1-201ENST00000604653 858 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC097468.3-201ENST00000607956 456 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC104010.1-201ENST00000616889 150 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTP4Q96DX8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTP4Q96DX8 SEPT14P19-203ENST00000633205 211 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 CRYM-AS1-204ENST00000637983 556 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RTP4Q96DX8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTP4Q96DX8 AC024560.2-201ENST00000507981 1497 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTP4Q96DX8 MTND5P26-201ENST00000426018 1752 ntBASIC3.79□□□□□ -1.8
RTP4Q96DX8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RTP4Q96DX8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTP4Q96DX8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTP4Q96DX8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTP4Q96DX8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTP4Q96DX8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 RNA5SP42-201ENST00000364278 115 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 SNORA70.4-201ENST00000365509 134 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 RNU6-921P-201ENST00000384361 107 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 SNORA40.3-201ENST00000390964 122 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 RHEBP3-201ENST00000411920 351 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 HMGN1P14-201ENST00000412459 517 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 RPL21P32-201ENST00000419877 477 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 AC069157.1-201ENST00000421749 137 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 RPS27AP14-201ENST00000422868 454 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTP4Q96DX8 AL138785.1-201ENST00000425821 331 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 AL445669.1-201ENST00000426743 755 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTP4Q96DX8 AL139415.2-201ENST00000431968 163 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 AC091862.1-201ENST00000438016 1100 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 RBMX2P4-201ENST00000441256 376 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 SNORD42A-201ENST00000459584 64 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 RPS20P21-201ENST00000466859 343 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 AC109464.2-201ENST00000510242 943 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 SOD1P3-201ENST00000518682 454 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 IGLVIV-53-201ENST00000520107 367 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTP4Q96DX8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.78□□□□□ -1.8
RTP4Q96DX8 MIR4738-201ENST00000579134 87 ntBASIC3.78□□□□□ -1.8
RTP4Q96DX8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms