Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 RPL21P5-201ENST00000554662 472 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC107954.1-201ENST00000565906 727 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 EIF1P4-201ENST00000572664 335 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC010680.3-201ENST00000604215 520 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC005000.2-201ENST00000605468 310 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC004492.1-201ENST00000607036 742 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC103710.1-201ENST00000610003 901 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 Y_RNA.46-201ENST00000362695 102 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 RNU6-989P-201ENST00000362756 107 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 RNU1-44P-201ENST00000384453 163 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 SNORA3.3-201ENST00000408712 125 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 RNU6-248P-201ENST00000410720 107 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC245052.5-201ENST00000416320 649 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 SPA17P1-201ENST00000416656 452 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 EZH2P1-201ENST00000431167 291 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 Z74696.2-201ENST00000436514 498 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC073614.1-201ENST00000438690 650 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 CYCSP32-201ENST00000440548 321 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 ST13P14-201ENST00000474095 734 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC021382.1-201ENST00000483523 359 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AL358832.1-201ENST00000497800 389 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC096751.1-202ENST00000502691 1067 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 UBE2CP3-201ENST00000502715 450 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC138853.1-201ENST00000503549 823 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 HMGB3P16-201ENST00000508037 287 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 TMEM248P1-201ENST00000510579 951 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 RNA5SP179-201ENST00000517284 121 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AP003467.2-201ENST00000520175 319 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC007991.1-201ENST00000522680 631 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC007599.1-201ENST00000568688 1174 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC025627.2-201ENST00000576220 160 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 MIR3682-201ENST00000581338 84 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC091167.4-201ENST00000605079 184 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 U3.45-201ENST00000607547 219 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 OR10AB1P-201ENST00000609613 938 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC005344.1-201ENST00000613391 459 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC079597.1-201ENST00000624306 508 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AC027514.1-201ENST00000588561 1603 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 MAPK10-286ENST00000641208 8747 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 AP004289.2-201ENST00000444413 1457 ntBASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM43Q96BQ3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM43Q96BQ3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.4□□□□□ -1.7
TRIM43Q96BQ3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.7
TRIM43Q96BQ3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.4□□□□□ -1.7
TRIM43Q96BQ3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM43Q96BQ3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM43Q96BQ3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM43Q96BQ3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.4□□□□□ -1.7
TRIM43Q96BQ3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 FRG1BP-201ENST00000278882 761 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 RNU6-263P-201ENST00000363811 107 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 RNU6-359P-201ENST00000365466 108 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 RNU5A-6P-201ENST00000384136 116 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AL161631.1-201ENST00000417933 486 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AL035423.1-201ENST00000420331 213 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 HSPD1P21-201ENST00000436541 245 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 UBE2V1P13-201ENST00000436983 439 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms