Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC124947.2-202ENST00000552735 133 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AC092325.1-201ENST00000566449 554 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.09□□□□□ -1.59
RTF1Q92541 MIR4504-201ENST00000577413 92 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 MIR4429-201ENST00000580105 73 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.09□□□□□ -1.59
RTF1Q92541 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.09□□□□□ -1.59
RTF1Q92541 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.09□□□□□ -1.59
RTF1Q92541 AL359999.1-201ENST00000604513 294 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AF250324.2-201ENST00000608299 610 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.09□□□□□ -1.59
RTF1Q92541 AC090970.3-201ENST00000612566 866 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.09□□□□□ -1.59
RTF1Q92541 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RTF1Q92541 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RTF1Q92541 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.08□□□□□ -1.6
RTF1Q92541 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTF1Q92541 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RTF1Q92541 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RTF1Q92541 AL031679.1-201ENST00000400616 525 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 HSPD1P16-201ENST00000402302 394 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 MTCO1P17-201ENST00000411522 491 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.08□□□□□ -1.6
RTF1Q92541 AL353597.2-202ENST00000434901 373 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.08□□□□□ -1.6
RTF1Q92541 NOTCH2P1-201ENST00000443481 624 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.08□□□□□ -1.6
RTF1Q92541 AC104563.1-201ENST00000476147 376 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.08□□□□□ -1.6
RTF1Q92541 SLC25A15P5-201ENST00000508033 253 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.08□□□□□ -1.6
RTF1Q92541 RNA5SP154-201ENST00000516193 111 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 RNU6-314P-201ENST00000516574 104 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RTF1Q92541 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.08□□□□□ -1.6
RTF1Q92541 RPL21P5-201ENST00000554662 472 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 SNORA59B-202ENST00000578183 701 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 AC087499.8-201ENST00000578406 226 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 MIR3682-201ENST00000581338 84 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTF1Q92541 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.08□□□□□ -1.6
RTF1Q92541 AP001596.2-201ENST00000608410 312 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 AC136475.10-201ENST00000620253 385 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 AC039056.2-201ENST00000622261 511 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 AL008636.1-201ENST00000625038 1018 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 AC099654.13-201ENST00000639774 207 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.08□□□□□ -1.6
RTF1Q92541 FARSBP1-201ENST00000435808 1778 ntBASIC5.08□□□□□ -1.6
RTF1Q92541 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTF1Q92541 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTF1Q92541 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.07□□□□□ -1.6
RTF1Q92541 ELF2P3-201ENST00000445099 1506 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTF1Q92541 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTF1Q92541 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTF1Q92541 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTF1Q92541 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RTF1Q92541 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTF1Q92541 U1.1-201ENST00000384101 164 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RTF1Q92541 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.07□□□□□ -1.6
RTF1Q92541 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.07□□□□□ -1.6
RTF1Q92541 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.07□□□□□ -1.6
RTF1Q92541 RPS26P47-201ENST00000427219 348 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 MTND1P2-201ENST00000430604 821 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 RPS20P1-201ENST00000434853 354 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.07□□□□□ -1.6
RTF1Q92541 AL133547.1-201ENST00000448546 220 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 PSPHP1-201ENST00000450062 261 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 BX322784.1-201ENST00000455793 1077 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 MTCO1P42-201ENST00000457379 726 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.07□□□□□ -1.6
RTF1Q92541 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.07□□□□□ -1.6
RTF1Q92541 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.07□□□□□ -1.6
RTF1Q92541 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.07□□□□□ -1.6
RTF1Q92541 NRON-201ENST00000517270 370 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 MYL12AP1-201ENST00000518490 515 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AC022861.1-201ENST00000522981 663 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.07□□□□□ -1.6
RTF1Q92541 AC068446.3-201ENST00000555285 382 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AC008638.3-201ENST00000603341 463 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AL592295.2-201ENST00000612578 206 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AL121772.2-201ENST00000614331 297 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AL356321.1-201ENST00000621360 228 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AC124864.2-201ENST00000624736 186 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AC244258.1-201ENST00000637553 1071 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 SAGE4P-201ENST00000442271 3381 ntBASIC5.07□□□□□ -1.6
RTF1Q92541 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.07□□□□□ -1.6
RTF1Q92541 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
RTF1Q92541 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.07□□□□□ -1.6
RTF1Q92541 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTF1Q92541 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RTF1Q92541 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTF1Q92541 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.07□□□□□ -1.6
RTF1Q92541 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTF1Q92541 AC130650.2-201ENST00000618736 2403 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RTF1Q92541 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RTF1Q92541 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms