Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ZNF33CP-201ENST00000432492 2030 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 AC016745.2-201ENST00000608834 3443 ntBASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NKX2-3Q8TAU0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-960P-201ENST00000364056 120 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 MIR215-201ENST00000384858 110 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-130P-201ENST00000411112 103 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 EIF4EP2-201ENST00000422816 654 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AL590233.1-201ENST00000430017 456 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 RPL23AP15-201ENST00000450202 459 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AC006463.2-201ENST00000473326 348 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 PPP1R11P1-201ENST00000486095 376 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AC007686.1-201ENST00000488511 463 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 SERF1AP1-201ENST00000514575 187 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 RN7SKP67-201ENST00000515905 235 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-1338P-201ENST00000516328 91 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 MTND5P41-201ENST00000517498 206 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AC005341.1-201ENST00000571086 708 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AC090615.1-201ENST00000577519 154 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 MIR3144-201ENST00000579460 79 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 MIR4436B2-201ENST00000581415 91 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 MIR4436B1-201ENST00000583272 91 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AL451044.1-201ENST00000604867 238 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AC090607.5-201ENST00000615692 224 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 U6.106-201ENST00000636360 105 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 TRIM51GP-201ENST00000534741 1350 ntBASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NKX2-3Q8TAU0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 snoU2_19.2-201ENST00000363024 80 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 MIR649-201ENST00000384843 97 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 MIR141-201ENST00000384975 95 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AL023807.1-201ENST00000407932 359 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 RNU6-174P-201ENST00000410406 106 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 BMS1P22-201ENST00000414726 313 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 RPL21P109-201ENST00000422213 475 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 BX276092.3-201ENST00000424182 230 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 RPL37P1-201ENST00000432310 284 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC005229.2-201ENST00000456995 399 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 RNU7-59P-201ENST00000459101 61 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 COX6CP14-201ENST00000469580 174 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 MRPL42P6-201ENST00000486397 371 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC069499.1-201ENST00000489433 509 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 SOD1P3-201ENST00000518682 454 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 RANP3-201ENST00000530970 276 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC126177.3-201ENST00000551839 688 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC093227.2-201ENST00000589357 285 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC011921.3-201ENST00000605540 361 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC123768.4-201ENST00000616244 701 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AL596245.1-201ENST00000618994 362 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC132068.1-201ENST00000623805 459 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 AC004076.2-201ENST00000620532 3323 ntBASIC6.55□□□□□ -1.36
NKX2-3Q8TAU0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.54□□□□□ -1.36
NKX2-3Q8TAU0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms