Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC092809.3-201ENST00000415453 231 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 NCOR1P3-201ENST00000420479 303 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AL645937.1-202ENST00000421799 937 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 NRBF2P3-201ENST00000432731 865 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC064862.5-201ENST00000440618 334 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 PA2G4P1-201ENST00000442248 1197 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 SCARNA18-201ENST00000459004 134 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC083829.1-201ENST00000503756 657 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 RNA5SP154-201ENST00000516193 111 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 RN7SKP70-201ENST00000516655 271 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 RPL7P20-201ENST00000520308 745 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC090151.1-201ENST00000520784 730 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC022360.1-201ENST00000521058 340 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 RAB11AP2-201ENST00000545905 639 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC037471.2-201ENST00000564941 598 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AL117336.2-201ENST00000602435 335 ntBASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.2□□□□□ -1.74
CLRN3Q8NCR9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC121333.1-201ENST00000567488 2709 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 MTND4P29-201ENST00000503122 1372 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 U3.12-201ENST00000364498 214 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 RNA5SP85-201ENST00000365378 119 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 RNU6-1127P-201ENST00000384580 107 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 RNA5SP104-201ENST00000410989 118 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 DPPA2P3-201ENST00000411853 655 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 MTND3P8-201ENST00000412909 339 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 GAPDHP48-201ENST00000436626 961 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 IFNA20P-201ENST00000436840 528 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 RPS26P2-201ENST00000440331 348 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC008264.1-201ENST00000447612 367 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 KF459542.1-201ENST00000450908 553 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AL356981.1-201ENST00000454879 684 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC022133.1-201ENST00000490961 571 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 SNORA70.16-201ENST00000516390 95 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 RN7SKP256-201ENST00000517201 314 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 RANP9-201ENST00000519957 271 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC107953.1-201ENST00000522216 297 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 HIGD1AP5-201ENST00000529959 259 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC005668.1-201ENST00000571142 476 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC008638.3-201ENST00000603341 463 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC087763.1-201ENST00000603391 286 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 MIR6885-201ENST00000612241 66 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AL627230.1-201ENST00000613077 211 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 AC008568.2-201ENST00000623862 2313 ntBASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLRN3Q8NCR9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms