Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 MTCO2P20-201ENST00000437339 673 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 MTND3P1-201ENST00000441336 220 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AL359073.1-201ENST00000448036 403 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 TRGVB-201ENST00000453257 471 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC026410.2-201ENST00000460281 156 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC112198.1-201ENST00000505369 1220 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC093853.1-201ENST00000515689 483 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 RNU6-583P-201ENST00000516012 92 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 RN7SKP287-201ENST00000516546 266 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 BNIP3P5-201ENST00000562290 498 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC015917.1-201ENST00000579654 510 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 MIR4286-201ENST00000580651 93 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 MIR4637-201ENST00000582405 84 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 BNIP3P11-201ENST00000603878 563 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC025588.2-201ENST00000604851 466 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AL591516.1-201ENST00000611326 274 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AC009159.2-201ENST00000617603 606 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 AP000484.1-201ENST00000620067 1252 ntBASIC2.8□□□□□ -1.96
CCDC71LQ8N9Z2 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 FAM133CP-201ENST00000332869 704 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 MIR148B-201ENST00000362252 99 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 RNU4-28P-201ENST00000364739 141 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 RNU1-13P-201ENST00000384499 162 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 MIR887-201ENST00000401258 79 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 RNU6-757P-201ENST00000410334 100 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC245052.5-201ENST00000416320 649 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 TIMM9P2-201ENST00000419324 266 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC019178.2-201ENST00000423595 505 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AL590233.1-201ENST00000430017 456 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 RPL23AP74-201ENST00000437246 471 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC009969.1-201ENST00000438726 172 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 MTND2P19-201ENST00000449129 1012 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 SNORD105B-201ENST00000458770 79 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC021146.8-201ENST00000507455 733 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC111000.2-201ENST00000507775 550 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 XKRY-201ENST00000510392 1100 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC010625.1-201ENST00000511296 403 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC010587.2-201ENST00000511727 448 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC112673.1-201ENST00000513168 575 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC026402.1-201ENST00000513642 170 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 SNRPGP16-201ENST00000533275 226 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC084824.1-201ENST00000550917 1005 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AL512347.1-201ENST00000566420 503 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 RPL23AP92-201ENST00000603609 255 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC009220.3-201ENST00000604318 586 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC069304.2-201ENST00000605154 435 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC131902.3-201ENST00000611767 581 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AL110115.1-201ENST00000614396 364 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC140725.3-201ENST00000616193 880 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC004009.2-201ENST00000623016 728 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AC095031.1-201ENST00000623685 672 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 AP000776.1-201ENST00000530032 1663 ntBASIC2.79□□□□□ -1.96
CCDC71LQ8N9Z2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms