Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RPS4XP6-201ENST00000477670 797 ntBASIC2.98□□□□□ -1.93
VPS8Q8N3P4 AC116337.1-201ENST00000509680 687 ntBASIC2.98□□□□□ -1.93
VPS8Q8N3P4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 AL022099.1-201ENST00000604551 712 ntBASIC2.98□□□□□ -1.93
VPS8Q8N3P4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 AC022336.2-201ENST00000568966 2538 ntBASIC2.98□□□□□ -1.93
VPS8Q8N3P4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VPS8Q8N3P4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS8Q8N3P4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VPS8Q8N3P4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS8Q8N3P4 ZYG11AP1-201ENST00000430329 837 ntBASIC2.97□□□□□ -1.93
VPS8Q8N3P4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS8Q8N3P4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS8Q8N3P4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
VPS8Q8N3P4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS8Q8N3P4 RPL23AP78-201ENST00000599928 470 ntBASIC2.97□□□□□ -1.93
VPS8Q8N3P4 AC011890.2-201ENST00000613393 294 ntBASIC2.97□□□□□ -1.93
VPS8Q8N3P4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS8Q8N3P4 AL118496.1-201ENST00000440201 1812 ntBASIC2.97□□□□□ -1.93
VPS8Q8N3P4 RNA5SP99-201ENST00000364020 114 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
VPS8Q8N3P4 HMGB1P10-201ENST00000395823 563 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 XKRYP4-201ENST00000414395 483 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS8Q8N3P4 AC007677.1-201ENST00000445757 515 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 XKRYP5-201ENST00000449659 483 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 FAM92A1P2-202ENST00000504766 877 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 RNU6-295P-201ENST00000516901 104 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 HMGN1P28-201ENST00000521340 364 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS8Q8N3P4 AP001180.3-201ENST00000582221 145 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 AP004247.3-201ENST00000608682 624 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS8Q8N3P4 AC110774.1-201ENST00000623567 2018 ntBASIC2.96□□□□□ -1.94
VPS8Q8N3P4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS8Q8N3P4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS8Q8N3P4 RNU6-304P-201ENST00000364855 107 ntBASIC2.95□□□□□ -1.94
VPS8Q8N3P4 RNA5SP138-201ENST00000365098 114 ntBASIC2.95□□□□□ -1.94
VPS8Q8N3P4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS8Q8N3P4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS8Q8N3P4 AC072039.1-201ENST00000477611 581 ntBASIC2.95□□□□□ -1.94
VPS8Q8N3P4 AC012181.1-201ENST00000479895 423 ntBASIC2.95□□□□□ -1.94
VPS8Q8N3P4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS8Q8N3P4 MIR4255-201ENST00000579351 72 ntBASIC2.95□□□□□ -1.94
VPS8Q8N3P4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.95□□□□□ -1.94
VPS8Q8N3P4 AC090425.2-201ENST00000608818 501 ntBASIC2.95□□□□□ -1.94
VPS8Q8N3P4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS8Q8N3P4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS8Q8N3P4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS8Q8N3P4 ZNF72P-201ENST00000425869 1908 ntBASIC2.95□□□□□ -1.94
VPS8Q8N3P4 METTL21EP-201ENST00000298105 713 ntBASIC2.94□□□□□ -1.94
VPS8Q8N3P4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS8Q8N3P4 RNU2-20P-201ENST00000410425 191 ntBASIC2.94□□□□□ -1.94
VPS8Q8N3P4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS8Q8N3P4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS8Q8N3P4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS8Q8N3P4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS8Q8N3P4 RNU6-347P-201ENST00000516658 105 ntBASIC2.94□□□□□ -1.94
VPS8Q8N3P4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS8Q8N3P4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS8Q8N3P4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS8Q8N3P4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS8Q8N3P4 RNA5SP189-201ENST00000364920 115 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 SNORA26.9-201ENST00000391322 122 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 CYCSP49-201ENST00000420810 319 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 RPL30P3-201ENST00000424262 333 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AC073901.1-201ENST00000462471 408 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 RPS20P22-201ENST00000473700 357 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AL121594.5-201ENST00000631724 573 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 API5P2-201ENST00000397055 1498 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 MTND5P28-201ENST00000438005 1594 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 SNORA31-201ENST00000362607 130 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 RPL31P52-201ENST00000407532 367 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 EI24P1-201ENST00000416584 867 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AC090255.1-201ENST00000495779 349 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms