Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SYNE4Q8N205 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SYNE4Q8N205 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNE4Q8N205 RNU4-76P-201ENST00000364509 141 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 TMSB4XP8-201ENST00000402089 135 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 TMSB4XP6-201ENST00000415187 135 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 TMSB4XP1-201ENST00000424567 135 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SYNE4Q8N205 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 AL450263.2-201ENST00000439400 589 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 HMGB1P37-201ENST00000439613 609 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 AL831737.1-201ENST00000441288 271 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 PSPHP1-201ENST00000450062 261 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 AP000852.1-201ENST00000472460 573 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 RPS3AP14-201ENST00000483907 780 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 AC114981.1-201ENST00000503897 678 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 ARL4AP2-201ENST00000507378 601 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 RNU1-103P-201ENST00000516502 125 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 OR5AQ1P-201ENST00000527596 927 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 SLC2A13P1-201ENST00000531560 322 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 AC024224.1-201ENST00000538284 609 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 AC010133.1-201ENST00000615809 842 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 SCARNA15.3-201ENST00000626315 122 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 SCARNA4.1-201ENST00000628597 123 ntBASIC4.8□□□□□ -1.64
SYNE4Q8N205 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNE4Q8N205 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNE4Q8N205 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.8□□□□□ -1.64
SYNE4Q8N205 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNE4Q8N205 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNE4Q8N205 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SYNE4Q8N205 MTND5P17-201ENST00000418405 1603 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNE4Q8N205 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 OR5BR1P-201ENST00000524992 1330 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNE4Q8N205 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 CBX3P1-201ENST00000325243 554 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 MTCO3P40-201ENST00000392516 676 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC092634.6-201ENST00000418558 192 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 MTCYBP45-201ENST00000435243 565 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 AL354710.1-201ENST00000453641 246 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AL033528.1-201ENST00000453780 140 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 RPS15AP1-201ENST00000457423 391 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 APOOP2-201ENST00000461561 539 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 RPS26P28-201ENST00000470806 348 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC012170.1-201ENST00000495139 359 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 RNF138P1-201ENST00000502765 546 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 STMN1P2-201ENST00000508435 439 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 Y_RNA.704-201ENST00000516851 102 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 SNORA48.10-201ENST00000516965 160 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC239860.2-201ENST00000525886 270 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 OR4A12P-201ENST00000530847 918 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 OR6C73P-201ENST00000546432 358 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 CYP4A43P-201ENST00000568156 121 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 PSMA6P4-201ENST00000603247 718 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC090578.1-201ENST00000604955 591 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC136475.10-201ENST00000620253 385 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 MIR7154-201ENST00000620673 73 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AL359880.1-201ENST00000621879 266 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AP001005.3-201ENST00000622049 129 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 AC068880.5-201ENST00000624331 290 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 ZNF962P-201ENST00000443465 3140 ntBASIC4.79□□□□□ -1.64
SYNE4Q8N205 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SYNE4Q8N205 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNE4Q8N205 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms