Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AL590664.1-201ENST00000448065 339 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.37□□□□□ -2.03
DDX60Q8IY21 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
DDX60Q8IY21 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.37□□□□□ -2.03
DDX60Q8IY21 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.37□□□□□ -2.03
DDX60Q8IY21 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.37□□□□□ -2.03
DDX60Q8IY21 PSMA6P4-201ENST00000603247 718 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 RPAP2P1-201ENST00000603626 1168 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 AC009314.1-201ENST00000603871 304 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 AP004372.1-201ENST00000604842 844 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 AC091953.2-201ENST00000623979 160 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
DDX60Q8IY21 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
DDX60Q8IY21 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.37□□□□□ -2.03
DDX60Q8IY21 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.37□□□□□ -2.03
DDX60Q8IY21 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DDX60Q8IY21 RPS3AP23-202ENST00000574601 686 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 AC002984.1-201ENST00000591692 448 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 snoU13.31-201ENST00000607291 104 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 AC092954.1-201ENST00000609121 445 ntBASIC2.37□□□□□ -2.03
DDX60Q8IY21 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
DDX60Q8IY21 MTND1P23-201ENST00000416931 372 ntBASIC2.36□□□□□ -2.03
DDX60Q8IY21 SEC63P1-201ENST00000425785 1258 ntBASIC2.36□□□□□ -2.03
DDX60Q8IY21 AC109583.1-201ENST00000432156 268 ntBASIC2.36□□□□□ -2.03
DDX60Q8IY21 AC005912.1-201ENST00000495392 255 ntBASIC2.36□□□□□ -2.03
DDX60Q8IY21 NAMPTP2-201ENST00000505629 1115 ntBASIC2.36□□□□□ -2.03
DDX60Q8IY21 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
DDX60Q8IY21 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
DDX60Q8IY21 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
DDX60Q8IY21 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX60Q8IY21 AC092638.1-201ENST00000411966 1275 ntBASIC2.35□□□□□ -2.03
DDX60Q8IY21 AL358453.1-201ENST00000422522 250 ntBASIC2.35□□□□□ -2.03
DDX60Q8IY21 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX60Q8IY21 AC068446.3-201ENST00000555285 382 ntBASIC2.35□□□□□ -2.03
DDX60Q8IY21 MIR5089-201ENST00000580047 84 ntBASIC2.35□□□□□ -2.03
DDX60Q8IY21 AC104307.1-201ENST00000616142 196 ntBASIC2.35□□□□□ -2.03
DDX60Q8IY21 AC084768.2-201ENST00000622736 221 ntBASIC2.35□□□□□ -2.03
DDX60Q8IY21 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
DDX60Q8IY21 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
DDX60Q8IY21 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX60Q8IY21 AC005539.1-201ENST00000443768 1479 ntBASIC2.34□□□□□ -2.03
DDX60Q8IY21 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
DDX60Q8IY21 MIRLET7G-201ENST00000362280 84 ntBASIC2.34□□□□□ -2.03
DDX60Q8IY21 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
DDX60Q8IY21 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX60Q8IY21 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.34□□□□□ -2.03
DDX60Q8IY21 TMEM248P1-201ENST00000510579 951 ntBASIC2.34□□□□□ -2.03
DDX60Q8IY21 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
DDX60Q8IY21 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX60Q8IY21 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX60Q8IY21 AP003117.2-201ENST00000606010 545 ntBASIC2.34□□□□□ -2.03
DDX60Q8IY21 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX60Q8IY21 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
DDX60Q8IY21 Y_RNA.40-201ENST00000362645 93 ntBASIC2.34□□□□□ -2.04
DDX60Q8IY21 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
DDX60Q8IY21 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.04
DDX60Q8IY21 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.34□□□□□ -2.04
DDX60Q8IY21 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC2.34□□□□□ -2.04
DDX60Q8IY21 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.34□□□□□ -2.04
DDX60Q8IY21 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.34□□□□□ -2.04
DDX60Q8IY21 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.34□□□□□ -2.04
DDX60Q8IY21 MIR4781-201ENST00000585250 76 ntBASIC2.34□□□□□ -2.04
DDX60Q8IY21 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
DDX60Q8IY21 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.33□□□□□ -2.04
DDX60Q8IY21 AL627390.1-201ENST00000396055 340 ntBASIC2.33□□□□□ -2.04
DDX60Q8IY21 AC023128.2-201ENST00000420880 1223 ntBASIC2.33□□□□□ -2.04
DDX60Q8IY21 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX60Q8IY21 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX60Q8IY21 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.33□□□□□ -2.04
DDX60Q8IY21 RNA5SP445-201ENST00000515889 115 ntBASIC2.33□□□□□ -2.04
DDX60Q8IY21 SEPT7P7-201ENST00000420492 1301 ntBASIC2.33□□□□□ -2.04
DDX60Q8IY21 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.33□□□□□ -2.04
DDX60Q8IY21 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX60Q8IY21 RNU6-457P-201ENST00000363999 107 ntBASIC2.32□□□□□ -2.04
DDX60Q8IY21 AC009414.1-201ENST00000427200 443 ntBASIC2.32□□□□□ -2.04
DDX60Q8IY21 NDUFB4P6-201ENST00000436819 366 ntBASIC2.32□□□□□ -2.04
DDX60Q8IY21 AC124916.1-201ENST00000444020 547 ntBASIC2.32□□□□□ -2.04
DDX60Q8IY21 AC109486.1-201ENST00000486833 374 ntBASIC2.32□□□□□ -2.04
DDX60Q8IY21 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX60Q8IY21 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.32□□□□□ -2.04
DDX60Q8IY21 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX60Q8IY21 AC011611.5-201ENST00000552477 578 ntBASIC2.32□□□□□ -2.04
DDX60Q8IY21 C2orf27A-204ENST00000623058 969 ntBASIC2.32□□□□□ -2.04
DDX60Q8IY21 AC002064.3-201ENST00000623448 346 ntBASIC2.32□□□□□ -2.04
DDX60Q8IY21 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX60Q8IY21 Y_RNA.269-201ENST00000364685 89 ntBASIC2.31□□□□□ -2.04
DDX60Q8IY21 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
DDX60Q8IY21 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
DDX60Q8IY21 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX60Q8IY21 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.31□□□□□ -2.04
DDX60Q8IY21 HIGD1AP11-201ENST00000438361 280 ntBASIC2.31□□□□□ -2.04
DDX60Q8IY21 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.31□□□□□ -2.04
DDX60Q8IY21 RPL23AP63-201ENST00000498752 471 ntBASIC2.31□□□□□ -2.04
DDX60Q8IY21 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
DDX60Q8IY21 KATNBL1P1-201ENST00000605192 748 ntBASIC2.31□□□□□ -2.04
DDX60Q8IY21 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.31□□□□□ -2.04
DDX60Q8IY21 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDX60Q8IY21 AC000367.1-201ENST00000452711 1766 ntBASIC2.31□□□□□ -2.04
DDX60Q8IY21 AL592437.2-201ENST00000421655 2434 ntBASIC2.31□□□□□ -2.04
DDX60Q8IY21 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms