Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC010205.1-201ENST00000616668 449 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC079684.1-201ENST00000621405 437 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AL356585.4-201ENST00000623078 1229 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AL592182.3-201ENST00000642132 3304 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC139713.2-215ENST00000641428 5037 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
VRK3Q8IV63 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VRK3Q8IV63 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VRK3Q8IV63 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VRK3Q8IV63 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VRK3Q8IV63 OR5P1P-201ENST00000299512 925 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RNU1-94P-201ENST00000362627 173 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RNU6-223P-201ENST00000362830 107 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RNU6-1097P-201ENST00000363586 107 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RNU6-343P-201ENST00000364709 104 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 SNORA20.2-201ENST00000383922 131 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RNU6-444P-201ENST00000383988 108 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 Y_RNA.422-201ENST00000384054 114 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AL136116.1-201ENST00000403591 381 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RPS4XP9-201ENST00000405151 780 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AL356967.1-201ENST00000406305 431 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC068287.1-201ENST00000430283 295 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 MTCO3P21-201ENST00000430791 643 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 RPL37P3-201ENST00000456825 293 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 APOOP2-201ENST00000461561 539 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RPL7P22-201ENST00000466005 733 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RPL35AP15-201ENST00000468042 339 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC010301.1-201ENST00000473936 355 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RPL23AP65-201ENST00000475608 468 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC104563.1-201ENST00000476147 376 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RPL38P4-201ENST00000502376 214 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC010587.1-201ENST00000505809 469 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC090572.1-201ENST00000519251 160 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 DYNLL1P4-201ENST00000549314 266 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 LARP7P2-201ENST00000575306 125 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 RN7SL176P-201ENST00000580352 264 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 MIR5096-201ENST00000583713 70 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 MIR3171-201ENST00000584270 74 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC010525.2-201ENST00000590920 195 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC068831.8-201ENST00000620171 435 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 AC091953.2-201ENST00000623979 160 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 U6.101-201ENST00000637707 76 ntBASIC4.29□□□□□ -1.72
VRK3Q8IV63 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VRK3Q8IV63 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VRK3Q8IV63 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VRK3Q8IV63 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VRK3Q8IV63 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VRK3Q8IV63 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VRK3Q8IV63 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 MTND4P35-201ENST00000604257 1375 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 RIOK3P1-201ENST00000418778 1528 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 Y_RNA.128-201ENST00000363391 112 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 RNU1-32P-201ENST00000363937 159 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 SNORD42.2-201ENST00000365570 69 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 TXNP7-201ENST00000406296 293 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 MIR1911-201ENST00000410783 80 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC019097.1-201ENST00000424783 735 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC022022.1-201ENST00000430304 178 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 RPL23AP52-201ENST00000439311 478 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 FHP1-201ENST00000442741 703 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC002381.1-201ENST00000447049 280 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 CACYBPP2-201ENST00000453625 678 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms