Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 GSTA12P-201ENST00000402398 508 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC005005.2-201ENST00000420779 380 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 RWDD4P2-201ENST00000426392 563 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 OR4K11P-201ENST00000431829 904 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AL590762.3-201ENST00000436372 640 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AL357520.1-201ENST00000441557 453 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AL137159.1-201ENST00000452808 512 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 RWDD4P1-201ENST00000488019 565 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 MLLT10P2-201ENST00000506434 249 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC010546.1-201ENST00000569391 485 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 MIR4716-201ENST00000579628 84 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC002076.2-201ENST00000617362 122 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC005336.3-201ENST00000623833 2679 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 RN7SKP123-201ENST00000410732 291 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 VN1R31P-201ENST00000417498 730 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC008173.1-201ENST00000418901 264 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 MTND4LP12-201ENST00000448237 295 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 RNU6-250P-201ENST00000516958 103 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC006116.7-201ENST00000590141 756 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC068790.3-201ENST00000602988 553 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 RLIMP2-201ENST00000427891 1563 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC243772.1-201ENST00000451620 410 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC117532.1-201ENST00000514638 323 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 HIGD1AP10-201ENST00000527837 282 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 Y_RNA.327-201ENST00000365201 102 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 IFNWP4-201ENST00000453148 294 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 RN7SKP40-201ENST00000517211 242 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 CBX3P4-201ENST00000538909 354 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 AL159169.2-201ENST00000610061 1269 ntBASIC1.38□□□□□ -2.19
CSMD3Q7Z407 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.38□□□□□ -2.19
CSMD3Q7Z407 NR1H5P-201ENST00000452683 1377 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AL049830.2-201ENST00000480072 201 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 TPMTP1-201ENST00000592307 737 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC005296.1-201ENST00000616145 209 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 RNU1-57P-201ENST00000384491 166 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC090819.1-201ENST00000523800 1111 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 MIR8081-201ENST00000611533 95 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC244517.1-201ENST00000606030 2086 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 RN7SKP226-201ENST00000364912 300 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 SNORD21-201ENST00000383953 95 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AIMP1P1-201ENST00000418670 937 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC108734.3-201ENST00000481241 1165 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.37□□□□□ -2.19
CSMD3Q7Z407 MIR4285-201ENST00000581001 85 ntBASIC1.37□□□□□ -2.19
CSMD3Q7Z407 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 RNY1-201ENST00000364228 113 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 RNU6-53P-201ENST00000365367 106 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 RN7SKP49-201ENST00000516675 260 ntBASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CSMD3Q7Z407 AL353748.2-201ENST00000622148 471 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms