Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 NIPA2P2-201ENST00000496376 1083 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 MTCO3P44-201ENST00000510977 541 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AC114797.1-201ENST00000514003 728 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 RNA5SP464-201ENST00000516251 108 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 RNU2-10P-201ENST00000516375 211 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AC125611.2-201ENST00000551907 647 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 ATP5J2P6-201ENST00000565203 266 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 SNORA74C-1-201ENST00000580726 201 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AC103710.2-201ENST00000609912 942 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AC091925.2-201ENST00000625059 256 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AL596275.2-204ENST00000641628 552 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AL596275.2-206ENST00000641957 626 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 PABPC1P7-201ENST00000413177 1513 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 RIOK3P1-201ENST00000418778 1528 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 FAM91A3P-201ENST00000456826 2544 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AL359893.1-201ENST00000447628 1580 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 RNU6-339P-201ENST00000384310 107 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 MIR558-201ENST00000384920 94 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 MIR454-201ENST00000390180 115 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AP000580.1-201ENST00000404439 358 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 MIR1250-201ENST00000408098 113 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 RN7SKP32-201ENST00000410167 303 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 MTCO3P12-201ENST00000416718 547 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AC009161.1-201ENST00000417306 376 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 MTCO3P46-201ENST00000425787 232 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AL732292.1-201ENST00000426692 226 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 CACYBPP2-201ENST00000453625 678 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 ST13P14-201ENST00000474095 734 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AC233702.1-201ENST00000482905 502 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 RNU6-27P-201ENST00000516146 107 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 RNU6-709P-201ENST00000517257 104 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AC022690.1-201ENST00000526681 550 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AP000857.1-201ENST00000532151 543 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AC037471.2-201ENST00000564941 598 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 MIR4277-201ENST00000578298 84 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 YWHAQP7-201ENST00000603536 658 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AC079684.1-201ENST00000621405 437 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AC112487.2-201ENST00000637950 304 ntBASIC5.26□□□□□ -1.57
RUFY4Q6ZNE9 AC090971.4-201ENST00000560291 1800 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 RN7SKP227-201ENST00000364445 330 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 MIR129-1-201ENST00000384972 72 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 RN7SKP247-201ENST00000411094 308 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 NCOR1P3-201ENST00000420479 303 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 RPL23AP38-201ENST00000423801 469 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AC079168.2-201ENST00000453977 416 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 RN7SL517P-201ENST00000462240 305 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AP000942.1-201ENST00000463969 747 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 RNU1-6P-201ENST00000516290 144 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AC243972.3-201ENST00000539655 198 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 RN7SL652P-201ENST00000577769 300 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AC010591.1-201ENST00000603941 649 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AL451044.1-201ENST00000604867 238 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms