Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC022893.2-201ENST00000564832 3296 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 RNA5SP258-201ENST00000362750 119 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 NDUFB4P5-201ENST00000415445 361 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC092832.1-201ENST00000422934 400 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC024082.2-201ENST00000434771 238 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 HMGB1P18-201ENST00000438801 619 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 EEF1A1P1-201ENST00000447052 739 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 PPP1R2P5-201ENST00000457256 603 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC007547.1-201ENST00000462177 490 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC096576.1-201ENST00000489014 359 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 RNU4-29P-201ENST00000515943 174 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 RNU6-709P-201ENST00000517257 104 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 MRPL49P2-201ENST00000521066 465 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 KC877982.1-201ENST00000602313 470 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC113139.1-201ENST00000605049 239 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 OR6R2P-201ENST00000609216 300 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC116447.1-201ENST00000613153 453 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC008785.1-201ENST00000624475 456 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 A2MP1-204ENST00000566278 4130 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AC133552.1-201ENST00000569988 4007 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 ASNSP3-201ENST00000451989 1306 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 Y_RNA.315-201ENST00000365117 102 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 RNU4-48P-201ENST00000365559 182 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AL359837.1-201ENST00000381357 287 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 MIR659-201ENST00000384963 97 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 EIF4HP2-201ENST00000424380 563 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 CKS1BP6-201ENST00000424932 240 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 PSMA6P3-201ENST00000428242 164 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 OR4K11P-201ENST00000431829 904 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 RPS20P5-201ENST00000434808 360 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 HMGN2P26-201ENST00000463169 339 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC021382.1-201ENST00000483523 359 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 RN7SL604P-201ENST00000492589 296 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 RPL30P11-201ENST00000495304 339 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 SNORA31.9-201ENST00000516429 84 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 PSMA3P-201ENST00000555485 635 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 NCAPGP2-201ENST00000557911 754 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC034105.4-201ENST00000568304 277 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 OR4K8P-201ENST00000578842 1048 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 uc_338.12-201ENST00000616344 181 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC090971.5-201ENST00000621102 293 ntBASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF40BQ6NWY9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 MTND5P3-201ENST00000438536 1800 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AL672167.1-205ENST00000641112 3080 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 STX3-208ENST00000641815 3236 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms