Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATL3Q6DD88 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 MIR6075-201ENST00000620782 95 ntBASIC3.23□□□□□ -1.89
ATL3Q6DD88 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATL3Q6DD88 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATL3Q6DD88 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.23□□□□□ -1.89
ATL3Q6DD88 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATL3Q6DD88 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATL3Q6DD88 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATL3Q6DD88 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 RNU6-839P-201ENST00000363347 108 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 RPS3AP26-201ENST00000398259 784 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AL603865.2-201ENST00000401679 213 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 RPS7P9-201ENST00000414704 586 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 USP9YP21-201ENST00000420603 432 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 FNDC3CP-201ENST00000420795 1155 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 DUTP6-201ENST00000425573 462 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 MTCYBP32-201ENST00000427945 1084 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 AC005345.1-201ENST00000431868 217 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 COX6CP18-201ENST00000448769 222 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 RPL37P4-201ENST00000448908 268 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AL136126.1-201ENST00000473603 402 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AC074250.1-201ENST00000511117 192 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 RNU6-885P-201ENST00000516607 104 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AC009812.2-201ENST00000517657 457 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AP003102.1-201ENST00000525638 661 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 AC007536.1-201ENST00000533382 349 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 AP001029.3-201ENST00000588063 596 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 DNAJC19P3-201ENST00000594491 331 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AL627309.6-201ENST00000606857 840 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AC005046.1-201ENST00000608515 625 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AP000238.1-201ENST00000608759 426 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 AL512506.2-201ENST00000624472 458 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 MIR6733-201ENST00000635723 61 ntBASIC3.22□□□□□ -1.89
ATL3Q6DD88 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.22□□□□□ -1.89
ATL3Q6DD88 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATL3Q6DD88 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.21□□□□□ -1.89
ATL3Q6DD88 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.21□□□□□ -1.89
ATL3Q6DD88 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
ATL3Q6DD88 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATL3Q6DD88 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATL3Q6DD88 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 RNU6-989P-201ENST00000362756 107 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 MIR592-201ENST00000384959 97 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 MIR34B-201ENST00000385076 84 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AL512633.1-201ENST00000399931 655 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 MIR887-201ENST00000401258 79 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC099677.1-201ENST00000420575 175 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC112653.1-201ENST00000443851 386 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 RPL36AP33-201ENST00000450395 310 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 PRSS3P4-201ENST00000453323 162 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC105914.1-201ENST00000511798 226 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC112206.4-201ENST00000515142 405 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 SNORA31.26-201ENST00000517250 137 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC023632.1-201ENST00000518463 375 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC104417.1-201ENST00000523974 751 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC087897.1-201ENST00000550134 156 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC122134.1-202ENST00000569111 1201 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 ZNF861P-201ENST00000588126 639 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC002076.2-201ENST00000617362 122 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AC018755.4-201ENST00000619715 454 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 AL138955.1-201ENST00000622881 1040 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 OR8B1P-202ENST00000641132 1178 ntBASIC3.21□□□□□ -1.9
ATL3Q6DD88 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms