Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 VN1R104P-201ENST00000505115 1009 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 KLHL2P1-201ENST00000508691 521 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC021146.1-201ENST00000511202 716 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 RNU2-10P-201ENST00000516375 211 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC105233.3-201ENST00000531125 744 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 MIR3167-201ENST00000579623 85 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC107304.1-201ENST00000604229 296 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AL450472.3-201ENST00000615578 367 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC006338.1-201ENST00000618453 749 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AL445567.2-201ENST00000618935 498 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AL353748.2-201ENST00000622148 471 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 FRG1KP-201ENST00000623592 341 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AP000542.2-201ENST00000623199 6179 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 TAB3P1-202ENST00000452645 1634 ntBASIC5.15□□□□□ -1.58
CCDC144BQ3MJ40 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC144BQ3MJ40 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC144BQ3MJ40 MAPK10-303ENST00000641324 3959 ntBASIC5.15□□□□□ -1.58
CCDC144BQ3MJ40 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC144BQ3MJ40 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC144BQ3MJ40 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
CCDC144BQ3MJ40 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC144BQ3MJ40 AP001350.1-201ENST00000601906 1524 ntBASIC5.15□□□□□ -1.58
CCDC144BQ3MJ40 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 RNA5SP388-201ENST00000362584 119 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 RNA5SP167-201ENST00000365461 116 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 RPL7AP73-201ENST00000413490 353 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 DPPA2P1-201ENST00000428060 556 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 RPL21P91-201ENST00000429231 479 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC073464.1-201ENST00000429823 534 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC011998.1-201ENST00000433403 117 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC073587.1-201ENST00000447093 876 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC093392.2-201ENST00000450682 337 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AP000873.1-201ENST00000463987 400 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC007537.2-201ENST00000472093 511 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 RPS15AP36-201ENST00000492022 382 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC068305.1-201ENST00000497406 726 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 SNORA31.9-201ENST00000516429 84 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AP003072.2-201ENST00000527756 676 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC023043.4-201ENST00000612081 449 ntBASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC144BQ3MJ40 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AL133412.1-201ENST00000380194 2992 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 UBE2FP1-201ENST00000416536 447 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 SSXP9-201ENST00000417503 292 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 EIF4EP1-201ENST00000422311 642 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 MTCO1P39-201ENST00000426148 480 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC090774.1-201ENST00000435925 246 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 MTATP6P13-201ENST00000438531 667 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC132479.1-201ENST00000449160 144 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AL162389.1-201ENST00000449233 177 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 NANOGP10-201ENST00000453325 895 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC004924.1-201ENST00000480160 781 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 HMGB1P22-201ENST00000505315 124 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC100870.1-201ENST00000522035 505 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms