Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCH1Q13635 AL353718.1-201ENST00000451028 517 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 RPS15AP1-201ENST00000457423 391 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 RPL23AP62-201ENST00000463396 453 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 SNRPGP3-201ENST00000469405 227 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 RPL23AP44-201ENST00000482216 473 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AC025768.1-201ENST00000510057 267 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 RN7SKP24-201ENST00000515888 284 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCH1Q13635 MTCYBP41-201ENST00000528913 1123 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCH1Q13635 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.61□□□□□ -1.83
PTCH1Q13635 AC107954.1-201ENST00000565906 727 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCH1Q13635 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCH1Q13635 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PTCH1Q13635 U4.3-201ENST00000621047 82 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCH1Q13635 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.6□□□□□ -1.83
PTCH1Q13635 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCH1Q13635 AC073055.1-201ENST00000456901 1621 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCH1Q13635 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC009487.2-201ENST00000420969 6821 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 ZNF542P-204ENST00000482727 1305 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC109315.1-201ENST00000584143 1347 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AL355578.1-201ENST00000607405 1328 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCH1Q13635 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PTCH1Q13635 RNU6-792P-201ENST00000363490 107 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 RNA5SP99-201ENST00000364020 114 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 RNU4-27P-201ENST00000410889 139 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AL357078.2-201ENST00000416486 427 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 RPS3AP9-201ENST00000417027 792 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC002542.1-201ENST00000440683 193 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.6□□□□□ -1.83
PTCH1Q13635 AL929288.2-201ENST00000446368 407 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 CACYBPP2-201ENST00000453625 678 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 NF1P3-201ENST00000457709 450 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC089999.1-201ENST00000460336 374 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 RPL21P99-201ENST00000480369 423 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC234781.5-201ENST00000508429 271 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 OR8K4P-201ENST00000534608 872 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC092470.1-201ENST00000546187 132 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC004217.3-201ENST00000551552 878 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCH1Q13635 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.6□□□□□ -1.83
PTCH1Q13635 AC079148.1-201ENST00000565944 819 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.6□□□□□ -1.83
PTCH1Q13635 AC009977.1-201ENST00000586015 570 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC006023.2-201ENST00000609916 167 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AL020991.1-201ENST00000612314 373 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AL445493.3-201ENST00000619568 477 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 MIR7111-201ENST00000619751 72 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AC006020.1-201ENST00000420179 1854 ntBASIC3.6□□□□□ -1.83
PTCH1Q13635 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.59□□□□□ -1.83
PTCH1Q13635 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.59□□□□□ -1.83
PTCH1Q13635 AL359893.1-201ENST00000447628 1580 ntBASIC3.59□□□□□ -1.83
PTCH1Q13635 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTCH1Q13635 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTCH1Q13635 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTCH1Q13635 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTCH1Q13635 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PTCH1Q13635 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTCH1Q13635 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.59□□□□□ -1.83
PTCH1Q13635 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.59□□□□□ -1.83
PTCH1Q13635 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
PTCH1Q13635 RNU6-1226P-201ENST00000384317 107 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 SFR1P1-201ENST00000403720 688 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.59□□□□□ -1.84
PTCH1Q13635 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.59□□□□□ -1.84
PTCH1Q13635 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.59□□□□□ -1.84
PTCH1Q13635 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PTCH1Q13635 AL158050.1-201ENST00000416077 457 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.59□□□□□ -1.84
PTCH1Q13635 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.59□□□□□ -1.84
PTCH1Q13635 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.59□□□□□ -1.84
PTCH1Q13635 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.59□□□□□ -1.84
PTCH1Q13635 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.59□□□□□ -1.84
PTCH1Q13635 AL662791.1-201ENST00000441992 928 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.59□□□□□ -1.84
PTCH1Q13635 GAPDHP39-201ENST00000481866 979 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 RN7SL283P-201ENST00000489055 303 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 HMGB1P38-201ENST00000490557 577 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 IGKV2D-36-201ENST00000518643 226 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.59□□□□□ -1.84
PTCH1Q13635 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.59□□□□□ -1.84
PTCH1Q13635 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.59□□□□□ -1.84
PTCH1Q13635 AL389895.1-201ENST00000554127 252 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 YWHAZP1-201ENST00000556286 722 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 AC023824.3-201ENST00000569003 562 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 HSPE1P14-201ENST00000605812 302 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 AC103710.3-201ENST00000608157 948 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 AC090425.2-201ENST00000608818 501 ntBASIC3.59□□□□□ -1.84
PTCH1Q13635 MTND5P27-201ENST00000428871 1720 ntBASIC3.58□□□□□ -1.84
PTCH1Q13635 ZNF734P-201ENST00000419494 1534 ntBASIC3.58□□□□□ -1.84
PTCH1Q13635 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTCH1Q13635 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PTCH1Q13635 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PTCH1Q13635 SNORD114-1-201ENST00000362705 72 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms