Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 VN1R7P-201ENST00000619242 903 ntBASIC2.99□□□□□ -1.93
SMARCB1Q12824 MIR6852-201ENST00000621699 66 ntBASIC2.99□□□□□ -1.93
SMARCB1Q12824 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.99□□□□□ -1.93
SMARCB1Q12824 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMARCB1Q12824 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 RNU1-35P-201ENST00000362782 153 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMARCB1Q12824 ARF4P3-201ENST00000397387 509 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 BMS1P22-201ENST00000414726 313 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 TOMM22P1-201ENST00000418578 312 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 ATG3P1-201ENST00000419507 911 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AL513043.1-201ENST00000439124 535 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC112653.1-201ENST00000443851 386 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC109471.1-201ENST00000511631 612 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 RNU1-61P-201ENST00000516107 151 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AP001207.1-201ENST00000524051 481 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 CYB5AP5-201ENST00000549779 389 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 SETP2-201ENST00000553886 926 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC104072.1-201ENST00000568817 668 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 MIR4504-201ENST00000577413 92 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SMARCB1Q12824 BPTFP1-201ENST00000579209 492 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC096947.1-201ENST00000603233 470 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC018926.1-201ENST00000616335 435 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC080188.3-201ENST00000624842 748 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC106858.1-201ENST00000637497 429 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC006927.2-201ENST00000639256 389 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 SGO1P1-201ENST00000603525 1447 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 MTND5P28-201ENST00000438005 1594 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AL359893.1-201ENST00000447628 1580 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AP001350.1-201ENST00000601906 1524 ntBASIC2.98□□□□□ -1.93
SMARCB1Q12824 AC093831.2-201ENST00000624393 3427 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 MIR26A1-201ENST00000362205 77 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 AL360182.1-201ENST00000397433 468 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 RNA5SP21-201ENST00000410917 96 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 MTCYBP24-201ENST00000420387 1106 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 RPL37P4-201ENST00000448908 268 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 RN7SL75P-201ENST00000461926 281 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC087879.1-201ENST00000474343 374 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 MTCO3P35-201ENST00000485582 781 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AP001025.2-201ENST00000490908 477 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC016550.1-201ENST00000505348 785 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC112206.4-201ENST00000515142 405 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 AP003102.1-201ENST00000525638 661 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AP000790.1-201ENST00000528891 737 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC068620.3-201ENST00000602749 560 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 RPAP2P1-201ENST00000603626 1168 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMARCB1Q12824 AL512427.1-201ENST00000618593 349 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC022509.4-201ENST00000621404 572 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC073348.1-201ENST00000623002 331 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.97□□□□□ -1.93
SMARCB1Q12824 AC009039.2-201ENST00000624524 529 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMARCB1Q12824 PABPC1P7-201ENST00000413177 1513 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 MTND5P19-201ENST00000424872 1794 ntBASIC2.97□□□□□ -1.93
SMARCB1Q12824 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.96□□□□□ -1.93
SMARCB1Q12824 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCB1Q12824 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMARCB1Q12824 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMARCB1Q12824 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCB1Q12824 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SMARCB1Q12824 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.96□□□□□ -1.94
SMARCB1Q12824 RNU6-444P-201ENST00000383988 108 ntBASIC2.96□□□□□ -1.94
SMARCB1Q12824 RPL21P75-201ENST00000396599 483 ntBASIC2.96□□□□□ -1.94
SMARCB1Q12824 RPL21P28-201ENST00000401418 483 ntBASIC2.96□□□□□ -1.94
SMARCB1Q12824 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.96□□□□□ -1.94
SMARCB1Q12824 AL592114.1-201ENST00000403842 483 ntBASIC2.96□□□□□ -1.94
SMARCB1Q12824 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCB1Q12824 MRPL50P2-201ENST00000416821 482 ntBASIC2.96□□□□□ -1.94
SMARCB1Q12824 NUP35P1-201ENST00000422734 947 ntBASIC2.96□□□□□ -1.94
SMARCB1Q12824 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms