Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC006445.2-201ENST00000510061 472 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AC008011.1-201ENST00000545989 227 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AC091516.1-201ENST00000549191 703 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AL354943.1-201ENST00000572103 781 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 RN7SL600P-201ENST00000581811 299 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AC093227.2-201ENST00000589357 285 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AC006539.2-201ENST00000601729 572 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AL357094.1-201ENST00000603845 844 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AC091167.4-201ENST00000605079 184 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AC090132.2-201ENST00000615881 347 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 MIR7151-201ENST00000617477 60 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AL161637.1-201ENST00000622380 412 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AC099063.3-201ENST00000642066 185 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SCN1BQ07699 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN1BQ07699 ZNF542P-204ENST00000482727 1305 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCN1BQ07699 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SCN1BQ07699 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AC058791.1-201ENST00000608412 3198 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SCN1BQ07699 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN1BQ07699 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCN1BQ07699 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCN1BQ07699 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 RNU6-433P-201ENST00000363216 104 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 RNA5SP130-201ENST00000364431 114 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SCN1BQ07699 SKINT1L-201ENST00000401057 817 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 RNU6-516P-201ENST00000411381 104 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 TPMTP3-201ENST00000411928 735 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 RPS24P7-201ENST00000416921 246 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC018630.2-202ENST00000422992 927 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 OR8F1P-201ENST00000425243 930 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN1BQ07699 RPL7L1P10-201ENST00000427790 463 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 RPL21P40-201ENST00000428586 483 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 UBE2V1P13-201ENST00000436983 439 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN1BQ07699 TRIM60P18-201ENST00000441518 828 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.32□□□□□ -1.88
SCN1BQ07699 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN1BQ07699 MTND2P24-201ENST00000453434 806 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 MTND1P9-201ENST00000453775 944 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AC010618.1-201ENST00000469924 477 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC084198.1-201ENST00000477747 402 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC034222.1-201ENST00000494052 532 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN1BQ07699 MTND4LP22-201ENST00000508209 276 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.32□□□□□ -1.88
SCN1BQ07699 GMPSP1-201ENST00000514075 579 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 RNU6-840P-201ENST00000517275 65 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AL133271.1-201ENST00000538229 291 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN1BQ07699 CCNG2P1-201ENST00000549521 1000 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.32□□□□□ -1.88
SCN1BQ07699 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN1BQ07699 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN1BQ07699 UBE2L4-201ENST00000587688 464 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AC068313.1-201ENST00000604028 1008 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC013553.2-201ENST00000604244 589 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.32□□□□□ -1.88
SCN1BQ07699 AC024560.3-201ENST00000608482 349 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC072039.2-201ENST00000608883 439 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC009464.1-201ENST00000615731 469 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC009268.2-201ENST00000621925 457 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AL158801.5-201ENST00000623123 465 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 AC079597.1-201ENST00000624306 508 ntBASIC3.32□□□□□ -1.88
SCN1BQ07699 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
SCN1BQ07699 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SCN1BQ07699 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SCN1BQ07699 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.32□□□□□ -1.88
SCN1BQ07699 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AC073073.2-201ENST00000609827 2578 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.31□□□□□ -1.88
SCN1BQ07699 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
SCN1BQ07699 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SCN1BQ07699 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SCN1BQ07699 RNA5SP443-201ENST00000363083 132 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms