Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HIST1H1AQ02539 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 MIR208A-201ENST00000362287 71 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 U8.8-201ENST00000365399 135 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AL513475.1-201ENST00000406602 315 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 U3.37-201ENST00000408528 213 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 RNU6-193P-201ENST00000410977 107 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 USP9YP20-201ENST00000419224 558 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC105272.1-201ENST00000438604 198 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC011816.1-201ENST00000441346 546 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 SNRPGP6-201ENST00000451124 220 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AL135752.1-201ENST00000479477 471 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC093663.2-201ENST00000484625 313 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC090096.1-201ENST00000489168 390 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC109329.2-201ENST00000519658 482 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 COX6CP8-201ENST00000522620 226 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC113192.3-201ENST00000529152 742 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 SNRPGP16-201ENST00000533275 226 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC126177.3-201ENST00000551839 688 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 SERPINE4P-201ENST00000554978 281 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC009127.3-201ENST00000570531 403 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC090666.1-201ENST00000578241 445 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 OR1M4P-201ENST00000589199 287 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AP001330.4-201ENST00000604350 154 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 HMGB1P51-201ENST00000605166 638 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 CU459211.1-201ENST00000635667 749 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC005336.3-201ENST00000623833 2679 ntBASIC1.94□□□□□ -2.1
HIST1H1AQ02539 AC010680.1-201ENST00000590024 3590 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC004944.1-201ENST00000517807 3059 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 RNU6-859P-201ENST00000362728 107 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 RNU6-461P-201ENST00000364195 107 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 RNA5SP387-201ENST00000364226 106 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 MIR491-201ENST00000384877 84 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AL356057.3-201ENST00000402607 340 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 RPLP0P7-201ENST00000416050 667 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 MTND1P23-201ENST00000416931 372 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 MRPS33P4-201ENST00000434892 317 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 PGBD4P3-201ENST00000440731 581 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 IPO7P1-201ENST00000442031 636 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC233279.1-201ENST00000455300 423 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC010099.1-201ENST00000455434 375 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC092798.1-201ENST00000458542 409 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC011825.1-201ENST00000484967 388 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC096751.1-202ENST00000502691 1067 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC008427.1-201ENST00000503102 655 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC096725.1-201ENST00000514266 313 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 RN7SKP283-201ENST00000517197 270 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC079600.2-201ENST00000550076 130 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AL049874.4-201ENST00000557593 255 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 AC023158.1-201ENST00000561632 1025 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 MIR4504-201ENST00000577413 92 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 DPRXP5-201ENST00000604662 539 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.93□□□□□ -2.1
HIST1H1AQ02539 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HIST1H1AQ02539 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms