Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
YBX1P67809 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.82□□□□□ -1.64
YBX1P67809 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.82□□□□□ -1.64
YBX1P67809 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
YBX1P67809 MTND5P19-201ENST00000424872 1794 ntBASIC4.82□□□□□ -1.64
YBX1P67809 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
YBX1P67809 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
YBX1P67809 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
YBX1P67809 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
YBX1P67809 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
YBX1P67809 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
YBX1P67809 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
YBX1P67809 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.82□□□□□ -1.64
YBX1P67809 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.81□□□□□ -1.64
YBX1P67809 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
YBX1P67809 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
YBX1P67809 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
YBX1P67809 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
YBX1P67809 AL022311.1-201ENST00000623726 19416 ntBASIC4.81□□□□□ -1.64
YBX1P67809 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
YBX1P67809 XPOTP1-201ENST00000443317 2398 ntBASIC4.81□□□□□ -1.64
YBX1P67809 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
YBX1P67809 RNU6-1188P-201ENST00000363795 107 ntBASIC4.81□□□□□ -1.64
YBX1P67809 Y_RNA.378-201ENST00000365652 113 ntBASIC4.81□□□□□ -1.64
YBX1P67809 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
YBX1P67809 RNU6-1029P-201ENST00000384109 107 ntBASIC4.81□□□□□ -1.64
YBX1P67809 SNORA51.8-201ENST00000384234 132 ntBASIC4.81□□□□□ -1.64
YBX1P67809 MIR92A2-201ENST00000385299 75 ntBASIC4.81□□□□□ -1.64
YBX1P67809 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
YBX1P67809 RNU6-985P-201ENST00000410182 104 ntBASIC4.81□□□□□ -1.64
YBX1P67809 AL590609.2-201ENST00000421430 368 ntBASIC4.81□□□□□ -1.64
YBX1P67809 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.81□□□□□ -1.64
YBX1P67809 AL160004.2-201ENST00000432935 350 ntBASIC4.81□□□□□ -1.64
YBX1P67809 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.81□□□□□ -1.64
YBX1P67809 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.81□□□□□ -1.64
YBX1P67809 RNU7-180P-201ENST00000459240 63 ntBASIC4.81□□□□□ -1.64
YBX1P67809 TRBVA-201ENST00000498804 316 ntBASIC4.81□□□□□ -1.64
YBX1P67809 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
YBX1P67809 RNA5SP503-201ENST00000517047 117 ntBASIC4.81□□□□□ -1.64
YBX1P67809 MTND4P7-201ENST00000523876 130 ntBASIC4.81□□□□□ -1.64
YBX1P67809 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
YBX1P67809 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.81□□□□□ -1.64
YBX1P67809 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.81□□□□□ -1.64
YBX1P67809 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.81□□□□□ -1.64
YBX1P67809 NDUFB4P11-201ENST00000560510 395 ntBASIC4.81□□□□□ -1.64
YBX1P67809 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.81□□□□□ -1.64
YBX1P67809 AC011477.5-201ENST00000586571 259 ntBASIC4.81□□□□□ -1.64
YBX1P67809 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.81□□□□□ -1.64
YBX1P67809 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.81□□□□□ -1.64
YBX1P67809 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.81□□□□□ -1.64
YBX1P67809 uc_338.34-201ENST00000617467 174 ntBASIC4.81□□□□□ -1.64
YBX1P67809 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.81□□□□□ -1.64
YBX1P67809 TAB3P1-202ENST00000452645 1634 ntBASIC4.81□□□□□ -1.64
YBX1P67809 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.81□□□□□ -1.64
YBX1P67809 SMG1P6-201ENST00000532337 2930 ntBASIC4.81□□□□□ -1.64
YBX1P67809 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
YBX1P67809 AC112198.2-201ENST00000426589 6996 ntBASIC4.81□□□□□ -1.64
YBX1P67809 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
YBX1P67809 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.81□□□□□ -1.64
YBX1P67809 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.8□□□□□ -1.64
YBX1P67809 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.8□□□□□ -1.64
YBX1P67809 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 AL049641.1-201ENST00000441055 1948 ntBASIC4.8□□□□□ -1.64
YBX1P67809 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
YBX1P67809 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 Y_RNA.188-201ENST00000363952 111 ntBASIC4.8□□□□□ -1.64
YBX1P67809 RNU5A-8P-201ENST00000364102 114 ntBASIC4.8□□□□□ -1.64
YBX1P67809 U3.11-201ENST00000364476 212 ntBASIC4.8□□□□□ -1.64
YBX1P67809 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
YBX1P67809 RNU6-784P-201ENST00000384330 106 ntBASIC4.8□□□□□ -1.64
YBX1P67809 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 MIR548F4-201ENST00000408515 105 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AC114482.1-201ENST00000418010 247 ntBASIC4.8□□□□□ -1.64
YBX1P67809 MED13P1-201ENST00000428342 171 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.8□□□□□ -1.64
YBX1P67809 AC005019.1-201ENST00000436455 431 ntBASIC4.8□□□□□ -1.64
YBX1P67809 FABP5P14-201ENST00000437273 393 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.8□□□□□ -1.64
YBX1P67809 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.8□□□□□ -1.64
YBX1P67809 AL354714.3-201ENST00000447284 493 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AL118520.1-201ENST00000450770 291 ntBASIC4.8□□□□□ -1.64
YBX1P67809 MTCO3P10-201ENST00000455912 772 ntBASIC4.8□□□□□ -1.64
YBX1P67809 ELOCP24-201ENST00000456370 334 ntBASIC4.8□□□□□ -1.64
YBX1P67809 SNRPFP3-201ENST00000457792 225 ntBASIC4.8□□□□□ -1.64
YBX1P67809 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.8□□□□□ -1.64
YBX1P67809 MIR2053-201ENST00000459295 91 ntBASIC4.8□□□□□ -1.64
YBX1P67809 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.8□□□□□ -1.64
YBX1P67809 AC021382.1-201ENST00000483523 359 ntBASIC4.8□□□□□ -1.64
YBX1P67809 RN7SL441P-201ENST00000492388 296 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AC073073.1-201ENST00000493920 463 ntBASIC4.8□□□□□ -1.64
YBX1P67809 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
YBX1P67809 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.8□□□□□ -1.64
YBX1P67809 HMGB1P41-201ENST00000520234 440 ntBASIC4.8□□□□□ -1.64
YBX1P67809 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.8□□□□□ -1.64
YBX1P67809 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.8□□□□□ -1.64
YBX1P67809 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms