Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MTND4P35-201ENST00000604257 1375 ntBASIC2.3□□□□□ -2.04
VBP1P61758 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.3□□□□□ -2.04
VBP1P61758 AC046144.1-201ENST00000478559 1853 ntBASIC2.3□□□□□ -2.04
VBP1P61758 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VBP1P61758 TPTE2P4-201ENST00000258589 1605 ntBASIC2.29□□□□□ -2.04
VBP1P61758 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.29□□□□□ -2.04
VBP1P61758 SNORA63.1-201ENST00000362493 131 ntBASIC2.29□□□□□ -2.04
VBP1P61758 U3.19-201ENST00000390893 196 ntBASIC2.29□□□□□ -2.04
VBP1P61758 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VBP1P61758 HMGB3P31-201ENST00000413333 595 ntBASIC2.29□□□□□ -2.04
VBP1P61758 LINC01347-201ENST00000417964 355 ntBASIC2.29□□□□□ -2.04
VBP1P61758 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VBP1P61758 MTCO1P39-201ENST00000426148 480 ntBASIC2.29□□□□□ -2.04
VBP1P61758 C4BPAP2-201ENST00000428434 478 ntBASIC2.29□□□□□ -2.04
VBP1P61758 AC022018.1-201ENST00000430685 241 ntBASIC2.29□□□□□ -2.04
VBP1P61758 AL139132.1-201ENST00000431587 344 ntBASIC2.29□□□□□ -2.04
VBP1P61758 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.29□□□□□ -2.04
VBP1P61758 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.29□□□□□ -2.04
VBP1P61758 AC011816.1-201ENST00000441346 546 ntBASIC2.29□□□□□ -2.04
VBP1P61758 AL358232.1-201ENST00000448030 501 ntBASIC2.29□□□□□ -2.04
VBP1P61758 DPPA3P1-201ENST00000448050 469 ntBASIC2.29□□□□□ -2.04
VBP1P61758 BTF3P5-201ENST00000457252 467 ntBASIC2.29□□□□□ -2.04
VBP1P61758 RPS4XP10-201ENST00000465034 731 ntBASIC2.29□□□□□ -2.04
VBP1P61758 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.29□□□□□ -2.04
VBP1P61758 AC008676.3-201ENST00000521237 435 ntBASIC2.29□□□□□ -2.04
VBP1P61758 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.29□□□□□ -2.04
VBP1P61758 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VBP1P61758 AC023824.2-201ENST00000566185 400 ntBASIC2.29□□□□□ -2.04
VBP1P61758 RPL23AP92-201ENST00000603609 255 ntBASIC2.29□□□□□ -2.04
VBP1P61758 AC002487.1-201ENST00000604565 994 ntBASIC2.29□□□□□ -2.04
VBP1P61758 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.29□□□□□ -2.04
VBP1P61758 AC073968.1-201ENST00000618594 637 ntBASIC2.29□□□□□ -2.04
VBP1P61758 AL353748.2-201ENST00000622148 471 ntBASIC2.29□□□□□ -2.04
VBP1P61758 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
VBP1P61758 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VBP1P61758 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VBP1P61758 AC004944.1-201ENST00000517807 3059 ntBASIC2.29□□□□□ -2.04
VBP1P61758 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.29□□□□□ -2.04
VBP1P61758 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.28□□□□□ -2.04
VBP1P61758 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
VBP1P61758 RPL21P132-201ENST00000331267 462 ntBASIC2.28□□□□□ -2.04
VBP1P61758 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
VBP1P61758 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
VBP1P61758 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VBP1P61758 FABP12P1-201ENST00000401911 322 ntBASIC2.28□□□□□ -2.04
VBP1P61758 VTA1P1-201ENST00000414044 866 ntBASIC2.28□□□□□ -2.04
VBP1P61758 RPL27AP8-201ENST00000424277 446 ntBASIC2.28□□□□□ -2.04
VBP1P61758 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.28□□□□□ -2.04
VBP1P61758 AC004975.1-201ENST00000428733 208 ntBASIC2.28□□□□□ -2.04
VBP1P61758 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.28□□□□□ -2.04
VBP1P61758 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.28□□□□□ -2.04
VBP1P61758 AC004866.2-201ENST00000438285 481 ntBASIC2.28□□□□□ -2.04
VBP1P61758 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.28□□□□□ -2.04
VBP1P61758 RPS15AP27-201ENST00000449183 343 ntBASIC2.28□□□□□ -2.04
VBP1P61758 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
VBP1P61758 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.28□□□□□ -2.04
VBP1P61758 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.28□□□□□ -2.04
VBP1P61758 AC108734.3-201ENST00000481241 1165 ntBASIC2.28□□□□□ -2.04
VBP1P61758 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VBP1P61758 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.28□□□□□ -2.04
VBP1P61758 AC093770.1-201ENST00000511559 571 ntBASIC2.28□□□□□ -2.04
VBP1P61758 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.28□□□□□ -2.04
VBP1P61758 ATP5F1P5-201ENST00000526403 760 ntBASIC2.28□□□□□ -2.04
VBP1P61758 AC087241.2-201ENST00000535801 324 ntBASIC2.28□□□□□ -2.04
VBP1P61758 AC007954.1-201ENST00000554198 494 ntBASIC2.28□□□□□ -2.04
VBP1P61758 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
VBP1P61758 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.28□□□□□ -2.04
VBP1P61758 AC115989.2-201ENST00000578640 563 ntBASIC2.28□□□□□ -2.04
VBP1P61758 MIR5004-201ENST00000579078 107 ntBASIC2.28□□□□□ -2.04
VBP1P61758 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.28□□□□□ -2.04
VBP1P61758 AC112503.2-201ENST00000609005 552 ntBASIC2.28□□□□□ -2.04
VBP1P61758 AL136295.6-201ENST00000610486 658 ntBASIC2.28□□□□□ -2.04
VBP1P61758 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VBP1P61758 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.27□□□□□ -2.05
VBP1P61758 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VBP1P61758 MIR421-201ENST00000365696 85 ntBASIC2.27□□□□□ -2.05
VBP1P61758 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.27□□□□□ -2.05
VBP1P61758 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.27□□□□□ -2.05
VBP1P61758 SNORA57.1-201ENST00000391227 145 ntBASIC2.27□□□□□ -2.05
VBP1P61758 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.27□□□□□ -2.05
VBP1P61758 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.27□□□□□ -2.05
VBP1P61758 MTND4LP20-201ENST00000402379 270 ntBASIC2.27□□□□□ -2.05
VBP1P61758 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.27□□□□□ -2.05
VBP1P61758 MTND1P23-201ENST00000416931 372 ntBASIC2.27□□□□□ -2.05
VBP1P61758 AC008280.1-201ENST00000418851 412 ntBASIC2.27□□□□□ -2.05
VBP1P61758 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.27□□□□□ -2.05
VBP1P61758 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.27□□□□□ -2.05
VBP1P61758 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.27□□□□□ -2.05
VBP1P61758 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.27□□□□□ -2.05
VBP1P61758 AC098614.2-201ENST00000426040 255 ntBASIC2.27□□□□□ -2.05
VBP1P61758 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.27□□□□□ -2.05
VBP1P61758 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.27□□□□□ -2.05
VBP1P61758 NUTF2P7-201ENST00000453086 375 ntBASIC2.27□□□□□ -2.05
VBP1P61758 AC097493.1-201ENST00000463958 372 ntBASIC2.27□□□□□ -2.05
VBP1P61758 OR52A4P-202ENST00000481634 799 ntBASIC2.27□□□□□ -2.05
VBP1P61758 OR52A4P-203ENST00000498233 1014 ntBASIC2.27□□□□□ -2.05
VBP1P61758 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.27□□□□□ -2.05
VBP1P61758 RNU6-202P-201ENST00000515998 96 ntBASIC2.27□□□□□ -2.05
VBP1P61758 RNA5SP282-201ENST00000516355 108 ntBASIC2.27□□□□□ -2.05
VBP1P61758 PSMA2P1-201ENST00000526365 646 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms