Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A1P61619 MIR153-1-201ENST00000384914 90 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 MIR181A1-201ENST00000385026 110 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 MIR3065-201ENST00000390137 79 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 CALM2P3-201ENST00000400429 449 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC097374.1-203ENST00000400783 485 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 GSTA9P-201ENST00000406231 611 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AL590002.1-201ENST00000406554 418 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 FCF1P10-201ENST00000407590 479 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 RPL23AP26-201ENST00000412728 464 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AC069157.1-201ENST00000421749 137 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.64□□□□□ -1.83
SEC61A1P61619 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AL589872.1-201ENST00000426602 288 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 BTF3P10-201ENST00000433415 495 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC009961.2-201ENST00000435771 251 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.64□□□□□ -1.83
SEC61A1P61619 RPL17P49-201ENST00000443728 411 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.64□□□□□ -1.83
SEC61A1P61619 NFU1P2-201ENST00000448700 469 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.64□□□□□ -1.83
SEC61A1P61619 PSPHP1-201ENST00000450062 261 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 USP9YP34-201ENST00000453983 808 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.64□□□□□ -1.83
SEC61A1P61619 RPL38P1-201ENST00000460914 211 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.64□□□□□ -1.83
SEC61A1P61619 RPL35AP15-201ENST00000468042 339 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC103987.1-201ENST00000473394 348 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC041039.1-201ENST00000485656 536 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AC006390.1-201ENST00000508068 283 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AC008549.1-201ENST00000512900 643 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.64□□□□□ -1.83
SEC61A1P61619 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.64□□□□□ -1.83
SEC61A1P61619 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AP003467.2-201ENST00000520175 319 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AL391840.1-201ENST00000571144 367 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.64□□□□□ -1.83
SEC61A1P61619 IPO5P1-202ENST00000600039 287 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC079587.1-201ENST00000603846 277 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AL354984.3-201ENST00000604803 325 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC110741.2-201ENST00000605278 268 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 MIR6716-201ENST00000613413 80 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 uc_338.13-201ENST00000618243 179 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.64□□□□□ -1.83
SEC61A1P61619 AL732618.1-201ENST00000623251 301 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.64□□□□□ -1.83
SEC61A1P61619 CYP3A51P-201ENST00000633513 256 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 LRRC77P-213ENST00000637727 880 ntBASIC3.64□□□□□ -1.83
SEC61A1P61619 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A1P61619 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A1P61619 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A1P61619 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEC61A1P61619 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
SEC61A1P61619 EIF2AP4-201ENST00000424793 1781 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 BDP1P-201ENST00000582658 1990 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 HSPA8P1-201ENST00000425843 1833 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AL158163.1-201ENST00000603915 1649 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A1P61619 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A1P61619 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.63□□□□□ -1.83
SEC61A1P61619 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A1P61619 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A1P61619 RNU1-132P-201ENST00000364300 164 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 RNU6-853P-201ENST00000364306 107 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.63□□□□□ -1.83
SEC61A1P61619 RNU6-730P-201ENST00000383954 104 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 Y_RNA.409-201ENST00000383990 98 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 SNORA70E-201ENST00000384492 135 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 SNORD66.1-201ENST00000391230 76 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.63□□□□□ -1.83
SEC61A1P61619 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.63□□□□□ -1.83
SEC61A1P61619 RPL31P2-201ENST00000413849 377 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AC127526.1-201ENST00000417526 366 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AL161631.1-201ENST00000417933 486 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 RPS12P23-201ENST00000419579 400 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AC092017.2-201ENST00000427600 362 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AC073464.1-201ENST00000429823 534 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SEC61A1P61619 MTND3P21-201ENST00000433774 331 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.63□□□□□ -1.83
SEC61A1P61619 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.63□□□□□ -1.83
SEC61A1P61619 HSPE1P28-201ENST00000443139 211 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 FAM103A2P-201ENST00000444122 354 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 NUTF2P3-201ENST00000448540 384 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AC079448.1-201ENST00000449377 373 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.63□□□□□ -1.83
SEC61A1P61619 RAD23BP3-201ENST00000454157 1152 ntBASIC3.63□□□□□ -1.83
SEC61A1P61619 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.63□□□□□ -1.83
SEC61A1P61619 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.63□□□□□ -1.83
SEC61A1P61619 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms