Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.78□□□□□ -1.96
VSX2P58304 AC093510.2-201ENST00000562820 896 ntBASIC2.78□□□□□ -1.96
VSX2P58304 AC122134.1-202ENST00000569111 1201 ntBASIC2.78□□□□□ -1.96
VSX2P58304 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.78□□□□□ -1.96
VSX2P58304 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.78□□□□□ -1.96
VSX2P58304 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.78□□□□□ -1.96
VSX2P58304 AC006504.3-201ENST00000586818 523 ntBASIC2.78□□□□□ -1.96
VSX2P58304 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.78□□□□□ -1.96
VSX2P58304 AC012669.1-201ENST00000603209 283 ntBASIC2.78□□□□□ -1.96
VSX2P58304 AP000238.1-201ENST00000608759 426 ntBASIC2.78□□□□□ -1.96
VSX2P58304 AC018755.4-201ENST00000619715 454 ntBASIC2.78□□□□□ -1.96
VSX2P58304 AC090617.7-201ENST00000623952 126 ntBASIC2.78□□□□□ -1.96
VSX2P58304 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
VSX2P58304 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.77□□□□□ -1.97
VSX2P58304 AL645568.2-201ENST00000432815 1337 ntBASIC2.77□□□□□ -1.97
VSX2P58304 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VSX2P58304 RNU6-7-201ENST00000364784 107 ntBASIC2.77□□□□□ -1.97
VSX2P58304 RNU6-8-201ENST00000365467 107 ntBASIC2.77□□□□□ -1.97
VSX2P58304 RNU6-549P-201ENST00000384433 107 ntBASIC2.77□□□□□ -1.97
VSX2P58304 RNU6-851P-201ENST00000384565 107 ntBASIC2.77□□□□□ -1.97
VSX2P58304 AL121978.1-201ENST00000402778 359 ntBASIC2.77□□□□□ -1.97
VSX2P58304 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.77□□□□□ -1.97
VSX2P58304 BOLA3P4-201ENST00000418151 400 ntBASIC2.77□□□□□ -1.97
VSX2P58304 RPS6P14-201ENST00000425165 719 ntBASIC2.77□□□□□ -1.97
VSX2P58304 Z93242.1-201ENST00000427102 353 ntBASIC2.77□□□□□ -1.97
VSX2P58304 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.77□□□□□ -1.97
VSX2P58304 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.77□□□□□ -1.97
VSX2P58304 AC025750.2-201ENST00000442609 450 ntBASIC2.77□□□□□ -1.97
VSX2P58304 COX6CP2-201ENST00000444980 225 ntBASIC2.77□□□□□ -1.97
VSX2P58304 SEPT14P24-201ENST00000447236 180 ntBASIC2.77□□□□□ -1.97
VSX2P58304 HMGB1P25-201ENST00000468402 607 ntBASIC2.77□□□□□ -1.97
VSX2P58304 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.77□□□□□ -1.97
VSX2P58304 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.77□□□□□ -1.97
VSX2P58304 AC096576.1-201ENST00000489014 359 ntBASIC2.77□□□□□ -1.97
VSX2P58304 AL024509.2-201ENST00000493462 493 ntBASIC2.77□□□□□ -1.97
VSX2P58304 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.77□□□□□ -1.97
VSX2P58304 AC004062.1-201ENST00000509926 645 ntBASIC2.77□□□□□ -1.97
VSX2P58304 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.77□□□□□ -1.97
VSX2P58304 RNA5SP135-201ENST00000517019 125 ntBASIC2.77□□□□□ -1.97
VSX2P58304 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.77□□□□□ -1.97
VSX2P58304 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
VSX2P58304 LSM6P2-201ENST00000552208 177 ntBASIC2.77□□□□□ -1.97
VSX2P58304 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VSX2P58304 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.77□□□□□ -1.97
VSX2P58304 AC012119.1-201ENST00000603184 222 ntBASIC2.77□□□□□ -1.97
VSX2P58304 AC009039.2-201ENST00000624524 529 ntBASIC2.77□□□□□ -1.97
VSX2P58304 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.77□□□□□ -1.97
VSX2P58304 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VSX2P58304 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.77□□□□□ -1.97
VSX2P58304 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VSX2P58304 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.77□□□□□ -1.97
VSX2P58304 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
VSX2P58304 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VSX2P58304 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VSX2P58304 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VSX2P58304 AL035425.3-201ENST00000564206 4996 ntBASIC2.76□□□□□ -1.97
VSX2P58304 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.76□□□□□ -1.97
VSX2P58304 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
VSX2P58304 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VSX2P58304 SNORA63.3-201ENST00000362682 132 ntBASIC2.76□□□□□ -1.97
VSX2P58304 SNORD82-201ENST00000365530 70 ntBASIC2.76□□□□□ -1.97
VSX2P58304 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.76□□□□□ -1.97
VSX2P58304 RNU6-837P-201ENST00000391056 108 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AC016769.3-201ENST00000396562 315 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AL603865.2-201ENST00000401679 213 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AL133264.1-201ENST00000407157 562 ntBASIC2.76□□□□□ -1.97
VSX2P58304 SNORA11.2-201ENST00000408318 127 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.76□□□□□ -1.97
VSX2P58304 AC092447.6-201ENST00000414578 210 ntBASIC2.76□□□□□ -1.97
VSX2P58304 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.76□□□□□ -1.97
VSX2P58304 RAC1P8-201ENST00000427086 527 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AC012497.1-201ENST00000429392 575 ntBASIC2.76□□□□□ -1.97
VSX2P58304 MTCYBP15-201ENST00000433123 1127 ntBASIC2.76□□□□□ -1.97
VSX2P58304 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
VSX2P58304 AC107083.1-201ENST00000439643 279 ntBASIC2.76□□□□□ -1.97
VSX2P58304 MTCO3P2-201ENST00000457365 171 ntBASIC2.76□□□□□ -1.97
VSX2P58304 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
VSX2P58304 RPS17P11-201ENST00000474297 293 ntBASIC2.76□□□□□ -1.97
VSX2P58304 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VSX2P58304 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VSX2P58304 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VSX2P58304 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VSX2P58304 RN7SKP43-201ENST00000516173 320 ntBASIC2.76□□□□□ -1.97
VSX2P58304 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
VSX2P58304 RNU6-711P-201ENST00000517255 106 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AP003066.2-201ENST00000529375 555 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.76□□□□□ -1.97
VSX2P58304 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.76□□□□□ -1.97
VSX2P58304 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.76□□□□□ -1.97
VSX2P58304 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VSX2P58304 AC090666.1-201ENST00000578241 445 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AC078899.3-201ENST00000599065 212 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.76□□□□□ -1.97
VSX2P58304 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.76□□□□□ -1.97
VSX2P58304 AC006329.2-201ENST00000611491 394 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AC084824.5-201ENST00000612009 413 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AC022509.4-201ENST00000621404 572 ntBASIC2.76□□□□□ -1.97
VSX2P58304 AC006963.1-201ENST00000624003 1052 ntBASIC2.76□□□□□ -1.97
VSX2P58304 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VSX2P58304 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms