Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH13P55290 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.55□□□□□ -1.84
CDH13P55290 AC084824.1-201ENST00000550917 1005 ntBASIC3.55□□□□□ -1.84
CDH13P55290 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH13P55290 AC087499.8-201ENST00000578406 226 ntBASIC3.55□□□□□ -1.84
CDH13P55290 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH13P55290 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH13P55290 AC112187.2-201ENST00000604345 283 ntBASIC3.55□□□□□ -1.84
CDH13P55290 RNU1-30P-201ENST00000606575 163 ntBASIC3.55□□□□□ -1.84
CDH13P55290 AC092354.2-201ENST00000607786 514 ntBASIC3.55□□□□□ -1.84
CDH13P55290 RMST_8.1-201ENST00000610287 165 ntBASIC3.55□□□□□ -1.84
CDH13P55290 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH13P55290 AL355810.1-201ENST00000614629 552 ntBASIC3.55□□□□□ -1.84
CDH13P55290 ZYXP1-201ENST00000617638 118 ntBASIC3.55□□□□□ -1.84
CDH13P55290 AL603755.1-201ENST00000619504 163 ntBASIC3.55□□□□□ -1.84
CDH13P55290 PCMTD1P7-201ENST00000634506 357 ntBASIC3.55□□□□□ -1.84
CDH13P55290 AP000553.6-201ENST00000641242 118 ntBASIC3.55□□□□□ -1.84
CDH13P55290 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH13P55290 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CDH13P55290 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH13P55290 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH13P55290 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH13P55290 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH13P55290 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH13P55290 RNU6-328P-201ENST00000390887 106 ntBASIC3.54□□□□□ -1.84
CDH13P55290 RPS3AP26-201ENST00000398259 784 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AL136116.1-201ENST00000403591 381 ntBASIC3.54□□□□□ -1.84
CDH13P55290 RN7SKP285-201ENST00000410137 318 ntBASIC3.54□□□□□ -1.84
CDH13P55290 CCDC58P2-201ENST00000417131 366 ntBASIC3.54□□□□□ -1.84
CDH13P55290 RSU1P2-202ENST00000437884 485 ntBASIC3.54□□□□□ -1.84
CDH13P55290 CYCSP43-201ENST00000438233 310 ntBASIC3.54□□□□□ -1.84
CDH13P55290 HMGB1P12-201ENST00000438594 598 ntBASIC3.54□□□□□ -1.84
CDH13P55290 CDC27P1-201ENST00000445384 715 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AP000542.1-201ENST00000448473 371 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AL133217.1-201ENST00000450980 425 ntBASIC3.54□□□□□ -1.84
CDH13P55290 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH13P55290 AC091564.1-201ENST00000464563 479 ntBASIC3.54□□□□□ -1.84
CDH13P55290 RPL30P9-201ENST00000465586 330 ntBASIC3.54□□□□□ -1.84
CDH13P55290 RPL30P6-201ENST00000475925 342 ntBASIC3.54□□□□□ -1.84
CDH13P55290 VN1R105P-201ENST00000486595 910 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AL139099.1-201ENST00000497398 403 ntBASIC3.54□□□□□ -1.84
CDH13P55290 MLLT10P2-201ENST00000506434 249 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AC002456.2-201ENST00000509356 380 ntBASIC3.54□□□□□ -1.84
CDH13P55290 RNU6-528P-201ENST00000516926 100 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AP003497.1-201ENST00000528472 562 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AP004247.1-201ENST00000531556 1289 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH13P55290 SETP2-201ENST00000553886 926 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH13P55290 ZNF192P1-203ENST00000565888 810 ntBASIC3.54□□□□□ -1.84
CDH13P55290 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH13P55290 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH13P55290 AP001004.1-201ENST00000582468 324 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AC053481.4-201ENST00000583164 216 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH13P55290 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH13P55290 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH13P55290 AC097468.3-201ENST00000607956 456 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AC092653.1-201ENST00000608509 531 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AL391497.1-201ENST00000608671 547 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AC090425.2-201ENST00000608818 501 ntBASIC3.54□□□□□ -1.84
CDH13P55290 VIS1.1-201ENST00000610517 203 ntBASIC3.54□□□□□ -1.84
CDH13P55290 AC005344.1-201ENST00000613391 459 ntBASIC3.54□□□□□ -1.84
CDH13P55290 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH13P55290 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH13P55290 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH13P55290 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH13P55290 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH13P55290 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH13P55290 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH13P55290 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
CDH13P55290 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH13P55290 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH13P55290 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CDH13P55290 FRG1BP-201ENST00000278882 761 ntBASIC3.53□□□□□ -1.84
CDH13P55290 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH13P55290 MIR135A2-201ENST00000384854 100 ntBASIC3.53□□□□□ -1.84
CDH13P55290 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.53□□□□□ -1.84
CDH13P55290 AL136372.1-201ENST00000403060 228 ntBASIC3.53□□□□□ -1.84
CDH13P55290 RNU6-628P-201ENST00000410675 107 ntBASIC3.53□□□□□ -1.84
CDH13P55290 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH13P55290 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH13P55290 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH13P55290 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH13P55290 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH13P55290 AC091390.1-201ENST00000433904 331 ntBASIC3.53□□□□□ -1.84
CDH13P55290 AC004866.2-201ENST00000438285 481 ntBASIC3.53□□□□□ -1.84
CDH13P55290 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH13P55290 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH13P55290 OR6C5P-201ENST00000452388 923 ntBASIC3.53□□□□□ -1.84
CDH13P55290 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH13P55290 HMGN2P7-201ENST00000456186 273 ntBASIC3.53□□□□□ -1.84
CDH13P55290 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH13P55290 CEACAMP4-201ENST00000457676 421 ntBASIC3.53□□□□□ -1.84
CDH13P55290 RPL9P32-201ENST00000464118 620 ntBASIC3.53□□□□□ -1.84
CDH13P55290 RPS4XP13-201ENST00000483219 789 ntBASIC3.53□□□□□ -1.84
CDH13P55290 FCF1P3-201ENST00000496394 590 ntBASIC3.53□□□□□ -1.84
CDH13P55290 AC021678.1-201ENST00000505195 936 ntBASIC3.53□□□□□ -1.84
CDH13P55290 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH13P55290 ARL2BPP6-201ENST00000512757 439 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms