Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.41□□□□□ -1.86
MSH6P52701 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.41□□□□□ -1.86
MSH6P52701 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.41□□□□□ -1.86
MSH6P52701 AC026464.5-201ENST00000562497 722 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.41□□□□□ -1.86
MSH6P52701 AP001180.3-201ENST00000582221 145 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AP001004.1-201ENST00000582468 324 ntBASIC3.41□□□□□ -1.86
MSH6P52701 MIR4506-201ENST00000584693 77 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AC010620.2-201ENST00000600135 313 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AP000942.3-201ENST00000603702 160 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AL671309.1-201ENST00000603750 544 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AC046143.2-201ENST00000609789 160 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AC107871.2-201ENST00000612894 502 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AC000367.1-201ENST00000452711 1766 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AC016717.2-201ENST00000609089 5141 ntBASIC3.41□□□□□ -1.86
MSH6P52701 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MSH6P52701 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
MSH6P52701 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.41□□□□□ -1.86
MSH6P52701 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
MSH6P52701 RNU6-650P-201ENST00000365658 111 ntBASIC3.4□□□□□ -1.86
MSH6P52701 RNU6-796P-201ENST00000391086 107 ntBASIC3.4□□□□□ -1.86
MSH6P52701 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.4□□□□□ -1.86
MSH6P52701 AC068135.1-201ENST00000446164 246 ntBASIC3.4□□□□□ -1.86
MSH6P52701 MTND2P30-201ENST00000456663 382 ntBASIC3.4□□□□□ -1.86
MSH6P52701 AC107222.1-201ENST00000510899 637 ntBASIC3.4□□□□□ -1.86
MSH6P52701 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.4□□□□□ -1.86
MSH6P52701 MTCYBP28-201ENST00000566728 1132 ntBASIC3.4□□□□□ -1.86
MSH6P52701 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.4□□□□□ -1.86
MSH6P52701 ZNF92P2-201ENST00000600543 1059 ntBASIC3.4□□□□□ -1.86
MSH6P52701 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
MSH6P52701 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MSH6P52701 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
MSH6P52701 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
MSH6P52701 SEPT7P7-201ENST00000420492 1301 ntBASIC3.4□□□□□ -1.87
MSH6P52701 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
MSH6P52701 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
MSH6P52701 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSH6P52701 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH6P52701 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.39□□□□□ -1.87
MSH6P52701 AL390023.1-201ENST00000428836 262 ntBASIC3.39□□□□□ -1.87
MSH6P52701 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.39□□□□□ -1.87
MSH6P52701 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH6P52701 HMGB3P30-201ENST00000457863 606 ntBASIC3.39□□□□□ -1.87
MSH6P52701 RN7SL499P-201ENST00000481141 276 ntBASIC3.39□□□□□ -1.87
MSH6P52701 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH6P52701 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.39□□□□□ -1.87
MSH6P52701 AC025768.1-201ENST00000510057 267 ntBASIC3.39□□□□□ -1.87
MSH6P52701 MTCO1P30-201ENST00000515244 580 ntBASIC3.39□□□□□ -1.87
MSH6P52701 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.39□□□□□ -1.87
MSH6P52701 AC083923.1-201ENST00000523708 376 ntBASIC3.39□□□□□ -1.87
MSH6P52701 C1DP5-201ENST00000525775 383 ntBASIC3.39□□□□□ -1.87
MSH6P52701 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH6P52701 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH6P52701 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.39□□□□□ -1.87
MSH6P52701 AC006270.2-201ENST00000578523 652 ntBASIC3.39□□□□□ -1.87
MSH6P52701 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.39□□□□□ -1.87
MSH6P52701 STMN1P1-201ENST00000617809 440 ntBASIC3.39□□□□□ -1.87
MSH6P52701 FRG1HP-204ENST00000617940 757 ntBASIC3.39□□□□□ -1.87
MSH6P52701 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.39□□□□□ -1.87
MSH6P52701 AC024595.1-201ENST00000623088 387 ntBASIC3.39□□□□□ -1.87
MSH6P52701 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MSH6P52701 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
MSH6P52701 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSH6P52701 GABPAP-201ENST00000419271 1356 ntBASIC3.39□□□□□ -1.87
MSH6P52701 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSH6P52701 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MSH6P52701 MTCO1P18-201ENST00000455518 1419 ntBASIC3.39□□□□□ -1.87
MSH6P52701 AL512646.1-201ENST00000269395 1077 ntBASIC3.38□□□□□ -1.87
MSH6P52701 RNA5SP391-201ENST00000363456 119 ntBASIC3.38□□□□□ -1.87
MSH6P52701 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
MSH6P52701 RNA5SP129-201ENST00000410276 118 ntBASIC3.38□□□□□ -1.87
MSH6P52701 RNU2-37P-201ENST00000410695 177 ntBASIC3.38□□□□□ -1.87
MSH6P52701 AL138799.3-201ENST00000438968 350 ntBASIC3.38□□□□□ -1.87
MSH6P52701 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.38□□□□□ -1.87
MSH6P52701 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.38□□□□□ -1.87
MSH6P52701 HMGB1P25-201ENST00000468402 607 ntBASIC3.38□□□□□ -1.87
MSH6P52701 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
MSH6P52701 RN7SL297P-201ENST00000483161 293 ntBASIC3.38□□□□□ -1.87
MSH6P52701 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.38□□□□□ -1.87
MSH6P52701 RPL23AP49-201ENST00000492925 468 ntBASIC3.38□□□□□ -1.87
MSH6P52701 AC090071.1-201ENST00000507713 644 ntBASIC3.38□□□□□ -1.87
MSH6P52701 MTND4P2-201ENST00000507767 1203 ntBASIC3.38□□□□□ -1.87
MSH6P52701 OR5D17P-201ENST00000531492 978 ntBASIC3.38□□□□□ -1.87
MSH6P52701 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.38□□□□□ -1.87
MSH6P52701 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.38□□□□□ -1.87
MSH6P52701 AC006116.7-201ENST00000590141 756 ntBASIC3.38□□□□□ -1.87
MSH6P52701 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH6P52701 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSH6P52701 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH6P52701 AC091948.2-201ENST00000636510 279 ntBASIC3.38□□□□□ -1.87
MSH6P52701 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.38□□□□□ -1.87
MSH6P52701 MFSD8-213ENST00000641134 1327 ntBASIC3.38□□□□□ -1.87
MSH6P52701 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.38□□□□□ -1.87
MSH6P52701 AP001148.1-201ENST00000624124 2359 ntBASIC3.38□□□□□ -1.87
MSH6P52701 Y_RNA.140-201ENST00000363474 103 ntBASIC3.38□□□□□ -1.87
MSH6P52701 RNU6-792P-201ENST00000363490 107 ntBASIC3.38□□□□□ -1.87
MSH6P52701 RNA5SP27-201ENST00000363839 119 ntBASIC3.38□□□□□ -1.87
MSH6P52701 RNU1-100P-201ENST00000365255 165 ntBASIC3.38□□□□□ -1.87
MSH6P52701 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH6P52701 UBE2V1P11-201ENST00000411559 285 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms