Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNU1-33P-201ENST00000364249 162 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 SNORA51.2-201ENST00000364595 132 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 RNU5E-5P-201ENST00000365379 116 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 RPL7AP73-201ENST00000413490 353 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.42□□□□□ -1.7
TM4SF4P48230 BX119904.4-201ENST00000424402 301 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TM4SF4P48230 MTCO2P16-201ENST00000436962 677 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC091862.1-201ENST00000438016 1100 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.42□□□□□ -1.7
TM4SF4P48230 MTND1P29-201ENST00000448112 647 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 USP9YP12-201ENST00000450481 570 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC104308.1-201ENST00000454621 333 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC099563.1-201ENST00000456086 418 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.42□□□□□ -1.7
TM4SF4P48230 MTCO1P42-201ENST00000457379 726 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 SNORD121B-201ENST00000458838 81 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC010285.1-201ENST00000470580 392 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 RPL23AP41-201ENST00000484754 458 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.42□□□□□ -1.7
TM4SF4P48230 RNU6-528P-201ENST00000516926 100 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC022695.1-201ENST00000522089 237 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TM4SF4P48230 AC109635.4-202ENST00000531666 412 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.42□□□□□ -1.7
TM4SF4P48230 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TM4SF4P48230 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.42□□□□□ -1.7
TM4SF4P48230 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.42□□□□□ -1.7
TM4SF4P48230 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.42□□□□□ -1.7
TM4SF4P48230 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.42□□□□□ -1.7
TM4SF4P48230 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.42□□□□□ -1.7
TM4SF4P48230 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.42□□□□□ -1.7
TM4SF4P48230 AC007424.1-203ENST00000554613 687 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
TM4SF4P48230 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.42□□□□□ -1.7
TM4SF4P48230 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.42□□□□□ -1.7
TM4SF4P48230 BCRP9-201ENST00000605312 388 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.42□□□□□ -1.7
TM4SF4P48230 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.42□□□□□ -1.7
TM4SF4P48230 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC105074.1-201ENST00000623380 3095 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC119674.1-207ENST00000641355 633 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TM4SF4P48230 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
TM4SF4P48230 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TM4SF4P48230 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TM4SF4P48230 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
TM4SF4P48230 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TM4SF4P48230 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TM4SF4P48230 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF4P48230 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF4P48230 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.41□□□□□ -1.7
TM4SF4P48230 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TM4SF4P48230 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
TM4SF4P48230 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.41□□□□□ -1.7
TM4SF4P48230 FGF7P2-201ENST00000332473 296 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 RNU6-173P-201ENST00000364215 104 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 MIR1251-201ENST00000408552 70 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 SNORA3C-201ENST00000408792 125 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 MIR1289-1-201ENST00000408836 144 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.41□□□□□ -1.7
TM4SF4P48230 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.41□□□□□ -1.7
TM4SF4P48230 AC005326.1-201ENST00000429197 123 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.41□□□□□ -1.7
TM4SF4P48230 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.41□□□□□ -1.7
TM4SF4P48230 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.41□□□□□ -1.7
TM4SF4P48230 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF4P48230 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.41□□□□□ -1.7
TM4SF4P48230 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.41□□□□□ -1.7
TM4SF4P48230 RNU6-956P-201ENST00000458868 103 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 RNA5SP269-201ENST00000459032 137 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AP000873.1-201ENST00000463987 400 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC004069.2-201ENST00000505438 1114 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC005921.1-201ENST00000510589 286 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC017037.2-201ENST00000513850 890 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC026801.2-201ENST00000515352 425 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC060788.1-201ENST00000521318 469 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF4P48230 AP002453.2-201ENST00000533503 320 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.41□□□□□ -1.7
TM4SF4P48230 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF4P48230 MTCYBP33-201ENST00000575007 1130 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC060771.1-201ENST00000582031 164 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.41□□□□□ -1.7
TM4SF4P48230 AC073544.2-201ENST00000601155 540 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC012065.4-201ENST00000602445 679 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AL358072.1-201ENST00000604156 575 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC135507.2-201ENST00000612443 309 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC140113.4-201ENST00000622087 222 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF4P48230 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TM4SF4P48230 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF4P48230 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF4P48230 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.41□□□□□ -1.7
TM4SF4P48230 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF4P48230 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TM4SF4P48230 CCT4P2-201ENST00000233836 1548 ntBASIC4.41□□□□□ -1.7
TM4SF4P48230 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF4P48230 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms