Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCNFP41002 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CCNFP41002 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCNFP41002 RNU6-1013P-201ENST00000384180 107 ntBASIC5.06□□□□□ -1.6
CCNFP41002 RNU6-1297P-201ENST00000384415 104 ntBASIC5.06□□□□□ -1.6
CCNFP41002 MIR153-1-201ENST00000384914 90 ntBASIC5.06□□□□□ -1.6
CCNFP41002 SNORA75.4-201ENST00000391278 119 ntBASIC5.06□□□□□ -1.6
CCNFP41002 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNFP41002 RNU6-1304P-201ENST00000411374 106 ntBASIC5.06□□□□□ -1.6
CCNFP41002 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNFP41002 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNFP41002 RNU7-180P-201ENST00000459240 63 ntBASIC5.06□□□□□ -1.6
CCNFP41002 AC004801.2-202ENST00000463559 283 ntBASIC5.06□□□□□ -1.6
CCNFP41002 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNFP41002 Y_RNA.682-201ENST00000516457 100 ntBASIC5.06□□□□□ -1.6
CCNFP41002 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNFP41002 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNFP41002 DEFB108D-201ENST00000527787 222 ntBASIC5.06□□□□□ -1.6
CCNFP41002 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.06□□□□□ -1.6
CCNFP41002 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNFP41002 CR383656.7-201ENST00000548164 174 ntBASIC5.06□□□□□ -1.6
CCNFP41002 AL118558.2-201ENST00000556294 238 ntBASIC5.06□□□□□ -1.6
CCNFP41002 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCNFP41002 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNFP41002 MIR4489-201ENST00000578869 62 ntBASIC5.06□□□□□ -1.6
CCNFP41002 MIR4458-201ENST00000578872 75 ntBASIC5.06□□□□□ -1.6
CCNFP41002 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNFP41002 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNFP41002 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNFP41002 AP001836.1-201ENST00000604675 523 ntBASIC5.06□□□□□ -1.6
CCNFP41002 AL390240.1-201ENST00000612950 384 ntBASIC5.06□□□□□ -1.6
CCNFP41002 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNFP41002 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNFP41002 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNFP41002 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
CCNFP41002 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNFP41002 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNFP41002 AL442639.1-201ENST00000625030 1899 ntBASIC5.05□□□□□ -1.6
CCNFP41002 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNFP41002 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCNFP41002 RNU6-989P-201ENST00000362756 107 ntBASIC5.05□□□□□ -1.6
CCNFP41002 U3.2-201ENST00000362981 210 ntBASIC5.05□□□□□ -1.6
CCNFP41002 RNU5E-6P-201ENST00000365574 115 ntBASIC5.05□□□□□ -1.6
CCNFP41002 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 Y_RNA.414-201ENST00000384011 101 ntBASIC5.05□□□□□ -1.6
CCNFP41002 RNU6-637P-201ENST00000384050 107 ntBASIC5.05□□□□□ -1.6
CCNFP41002 SNORA24.1-201ENST00000384401 135 ntBASIC5.05□□□□□ -1.6
CCNFP41002 Y_RNA.530-201ENST00000384587 101 ntBASIC5.05□□□□□ -1.6
CCNFP41002 DUTP5-201ENST00000406790 469 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 ARL5AP1-201ENST00000418991 388 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 BEND7P1-201ENST00000422058 457 ntBASIC5.05□□□□□ -1.6
CCNFP41002 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.05□□□□□ -1.6
CCNFP41002 KCTD9P3-201ENST00000434597 1169 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 PRPF38AP2-201ENST00000438179 851 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC005094.1-201ENST00000440420 368 ntBASIC5.05□□□□□ -1.6
CCNFP41002 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 RPL23AP33-201ENST00000442301 452 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNFP41002 AL590399.6-201ENST00000446396 307 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC010655.1-201ENST00000449336 292 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AL389915.2-201ENST00000454576 441 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC005008.1-201ENST00000456151 612 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC079804.1-201ENST00000461922 436 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC009127.1-201ENST00000467090 155 ntBASIC5.05□□□□□ -1.6
CCNFP41002 RPL23AP11-201ENST00000475260 469 ntBASIC5.05□□□□□ -1.6
CCNFP41002 RPL21P103-201ENST00000479921 488 ntBASIC5.05□□□□□ -1.6
CCNFP41002 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 AC020890.1-201ENST00000491837 504 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC104806.1-201ENST00000508720 308 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.05□□□□□ -1.6
CCNFP41002 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNFP41002 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 AC109635.4-202ENST00000531666 412 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.05□□□□□ -1.6
CCNFP41002 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.05□□□□□ -1.6
CCNFP41002 MIR3171-201ENST00000584270 74 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AL669831.4-202ENST00000590817 238 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AP001521.2-201ENST00000608772 546 ntBASIC5.05□□□□□ -1.6
CCNFP41002 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.05□□□□□ -1.6
CCNFP41002 AC134503.1-201ENST00000633048 54 ntBASIC5.05□□□□□ -1.6
CCNFP41002 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCNFP41002 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CCNFP41002 BDP1P-201ENST00000582658 1990 ntBASIC5.05□□□□□ -1.6
CCNFP41002 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCNFP41002 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNFP41002 GABPAP-201ENST00000419271 1356 ntBASIC5.04□□□□□ -1.6
CCNFP41002 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNFP41002 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCNFP41002 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCNFP41002 RNU4-44P-201ENST00000363050 141 ntBASIC5.04□□□□□ -1.6
CCNFP41002 RNU6-263P-201ENST00000363811 107 ntBASIC5.04□□□□□ -1.6
CCNFP41002 RN7SKP113-201ENST00000363891 295 ntBASIC5.04□□□□□ -1.6
CCNFP41002 SNORD115-7-201ENST00000365306 82 ntBASIC5.04□□□□□ -1.6
CCNFP41002 RNU6-43P-201ENST00000384302 107 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms