Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL354941.1-201ENST00000438600 464 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 UBE2D3P4-201ENST00000441973 436 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXC8P31273 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXC8P31273 VN1R17P-201ENST00000472048 1090 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AC017015.1-201ENST00000477387 286 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 RPS3AP43-201ENST00000479743 781 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC8P31273 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HOXC8P31273 GMPSP1-201ENST00000514075 579 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 RNU6-759P-201ENST00000516740 103 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 SNORA31.20-201ENST00000517111 133 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
HOXC8P31273 AC092851.1-201ENST00000535964 478 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXC8P31273 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXC8P31273 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXC8P31273 AC006539.2-201ENST00000601729 572 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AF131215.7-201ENST00000602443 707 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXC8P31273 AC106791.2-201ENST00000604680 391 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AC009090.3-201ENST00000616553 565 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AC073348.1-201ENST00000623002 331 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AC139792.2-201ENST00000624218 587 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 AC116618.1-201ENST00000634617 774 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXC8P31273 AP000526.1-201ENST00000603308 1388 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 ZNF833P-201ENST00000424938 1494 ntBASIC3.83□□□□□ -1.8
HOXC8P31273 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC8P31273 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
HOXC8P31273 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HOXC8P31273 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HOXC8P31273 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 AL645937.1-201ENST00000641739 1652 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 ZNF542P-204ENST00000482727 1305 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 RNU6-629P-201ENST00000384061 103 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 AL590084.2-201ENST00000401481 382 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 HSPE1P26-201ENST00000405341 275 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 OR1AA1P-201ENST00000419597 916 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 BX119904.4-201ENST00000424402 301 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC8P31273 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 MTCYBP34-201ENST00000439552 670 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 Z75741.1-201ENST00000446793 314 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 MTCO2P25-201ENST00000447065 681 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 AC084357.1-201ENST00000473404 255 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 RPS4XP13-201ENST00000483219 789 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 LINC00888-204ENST00000487386 421 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 AC004062.1-201ENST00000509926 645 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 MTCO2P32-201ENST00000514865 403 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC8P31273 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC8P31273 AC005832.3-201ENST00000537929 631 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 AC067852.3-201ENST00000589177 561 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC8P31273 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC8P31273 AC120349.2-201ENST00000625002 298 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 AC127502.3-201ENST00000636170 1206 ntBASIC3.82□□□□□ -1.8
HOXC8P31273 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HOXC8P31273 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HOXC8P31273 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC8P31273 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC8P31273 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC8P31273 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC8P31273 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC8P31273 U3.19-201ENST00000390893 196 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 HMGN2P8-201ENST00000391458 268 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 BX323014.1-201ENST00000412876 237 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 AC098592.1-201ENST00000419352 333 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 GLRXP1-201ENST00000423261 334 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AL512649.1-201ENST00000428997 581 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC8P31273 VN1R108P-201ENST00000431580 830 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 YWHAZP7-201ENST00000436906 631 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 HMGB1P12-201ENST00000438594 598 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms