Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.04□□□□□ -1.92
CLIP1P30622 Y_RNA.226-201ENST00000364337 114 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 SNORA17.3-201ENST00000391159 129 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.03□□□□□ -1.92
CLIP1P30622 AL445685.2-201ENST00000422551 342 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 HSPE1P28-201ENST00000443139 211 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 AC132942.1-201ENST00000486753 483 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 FABP5P6-201ENST00000510588 409 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 SNORA31.11-201ENST00000516528 139 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 SNORA31.15-201ENST00000516771 132 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.03□□□□□ -1.92
CLIP1P30622 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.03□□□□□ -1.92
CLIP1P30622 TRAV11-201ENST00000539512 339 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLIP1P30622 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.03□□□□□ -1.92
CLIP1P30622 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.03□□□□□ -1.92
CLIP1P30622 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.03□□□□□ -1.92
CLIP1P30622 ISCA1P3-201ENST00000577104 373 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 DUXAP3-201ENST00000603616 594 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 AC002064.3-201ENST00000623448 346 ntBASIC3.03□□□□□ -1.92
CLIP1P30622 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.03□□□□□ -1.92
CLIP1P30622 Y_RNA.338-201ENST00000365320 114 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 RNA5SP167-201ENST00000365461 116 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 RNU6-1320P-201ENST00000390838 107 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 RNU6-1269P-201ENST00000391139 107 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AL358453.1-201ENST00000422522 250 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.02□□□□□ -1.93
CLIP1P30622 WARS2P1-201ENST00000429678 537 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AC009961.3-201ENST00000449832 765 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.02□□□□□ -1.93
CLIP1P30622 RN7SKP210-201ENST00000459176 261 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 RNU6-599P-201ENST00000459383 107 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 RNU6-1193P-201ENST00000459461 107 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AC025181.1-201ENST00000477507 416 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 HMGB1P1-201ENST00000522557 636 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.02□□□□□ -1.93
CLIP1P30622 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.02□□□□□ -1.93
CLIP1P30622 AC002984.1-201ENST00000591692 448 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 RNU6-368P-201ENST00000620928 107 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 RNU6-538P-201ENST00000622329 107 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AL118496.1-201ENST00000440201 1812 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLIP1P30622 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLIP1P30622 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLIP1P30622 RNU2-20P-201ENST00000410425 191 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.02□□□□□ -1.93
CLIP1P30622 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.02□□□□□ -1.93
CLIP1P30622 VN1R48P-201ENST00000448149 1036 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AC092754.2-201ENST00000463506 460 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLIP1P30622 MIR4498-201ENST00000577599 66 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.02□□□□□ -1.93
CLIP1P30622 AC011468.4-201ENST00000603942 409 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AL121917.1-203ENST00000605534 577 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AL391813.2-201ENST00000609113 322 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AL159169.2-201ENST00000610061 1269 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 AC108479.2-201ENST00000617314 601 ntBASIC3.02□□□□□ -1.93
CLIP1P30622 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CLIP1P30622 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLIP1P30622 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLIP1P30622 Y_RNA.164-201ENST00000363709 102 ntBASIC3.01□□□□□ -1.93
CLIP1P30622 RNU6-146P-201ENST00000384602 108 ntBASIC3.01□□□□□ -1.93
CLIP1P30622 EI24P1-201ENST00000416584 867 ntBASIC3.01□□□□□ -1.93
CLIP1P30622 USP9YP27-201ENST00000418455 438 ntBASIC3.01□□□□□ -1.93
CLIP1P30622 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.01□□□□□ -1.93
CLIP1P30622 MTCYBP14-201ENST00000457471 715 ntBASIC3.01□□□□□ -1.93
CLIP1P30622 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.01□□□□□ -1.93
CLIP1P30622 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.01□□□□□ -1.93
CLIP1P30622 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.01□□□□□ -1.93
CLIP1P30622 ZNF192P1-203ENST00000565888 810 ntBASIC3.01□□□□□ -1.93
CLIP1P30622 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.01□□□□□ -1.93
CLIP1P30622 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.01□□□□□ -1.93
CLIP1P30622 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.01□□□□□ -1.93
CLIP1P30622 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.01□□□□□ -1.93
CLIP1P30622 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3□□□□□ -1.93
CLIP1P30622 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3□□□□□ -1.93
CLIP1P30622 AL138799.3-201ENST00000438968 350 ntBASIC3□□□□□ -1.93
CLIP1P30622 HSPE1P22-201ENST00000456856 327 ntBASIC3□□□□□ -1.93
CLIP1P30622 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3□□□□□ -1.93
CLIP1P30622 BNIP3P8-201ENST00000597863 560 ntBASIC3□□□□□ -1.93
CLIP1P30622 AL133393.1-201ENST00000603277 287 ntBASIC3□□□□□ -1.93
CLIP1P30622 AC128687.1-201ENST00000605304 619 ntBASIC3□□□□□ -1.93
CLIP1P30622 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLIP1P30622 RNA5SP37-201ENST00000365420 130 ntBASIC2.99□□□□□ -1.93
CLIP1P30622 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLIP1P30622 Y_RNA.595-201ENST00000410403 105 ntBASIC2.99□□□□□ -1.93
CLIP1P30622 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLIP1P30622 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.99□□□□□ -1.93
CLIP1P30622 AC108667.1-201ENST00000428618 249 ntBASIC2.99□□□□□ -1.93
CLIP1P30622 AL590664.1-201ENST00000448065 339 ntBASIC2.99□□□□□ -1.93
CLIP1P30622 RPL23AP63-201ENST00000498752 471 ntBASIC2.99□□□□□ -1.93
CLIP1P30622 NAMPTP2-201ENST00000505629 1115 ntBASIC2.99□□□□□ -1.93
CLIP1P30622 ARL4AP2-201ENST00000507378 601 ntBASIC2.99□□□□□ -1.93
CLIP1P30622 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.99□□□□□ -1.93
CLIP1P30622 RNU2-58P-201ENST00000516403 183 ntBASIC2.99□□□□□ -1.93
CLIP1P30622 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.99□□□□□ -1.93
CLIP1P30622 GNAI2P1-201ENST00000541815 315 ntBASIC2.99□□□□□ -1.93
CLIP1P30622 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.99□□□□□ -1.93
CLIP1P30622 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLIP1P30622 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms