Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC008162.1-201ENST00000604718 254 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.1-201ENST00000604752 252 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.2-201ENST00000604983 252 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.5-201ENST00000605253 252 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.4-201ENST00000605279 254 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.12-201ENST00000605291 253 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.8-201ENST00000605353 252 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.9-201ENST00000605428 253 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL670379.7-201ENST00000605823 252 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AC120053.1-201ENST00000607706 736 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AC013562.2-201ENST00000611632 603 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.43□□□□□ -2.02
COL4A5P29400 VN1R7P-201ENST00000619242 903 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 LRRC77P-213ENST00000637727 880 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL4A5P29400 PNPT1P2-201ENST00000456768 2050 ntBASIC2.43□□□□□ -2.02
COL4A5P29400 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.42□□□□□ -2.02
COL4A5P29400 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
COL4A5P29400 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
COL4A5P29400 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
COL4A5P29400 U8.10-201ENST00000384260 133 ntBASIC2.42□□□□□ -2.02
COL4A5P29400 AL590084.1-201ENST00000407885 387 ntBASIC2.42□□□□□ -2.02
COL4A5P29400 AC005005.2-201ENST00000420779 380 ntBASIC2.42□□□□□ -2.02
COL4A5P29400 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.42□□□□□ -2.02
COL4A5P29400 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL4A5P29400 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.42□□□□□ -2.02
COL4A5P29400 AL591719.1-201ENST00000444669 744 ntBASIC2.42□□□□□ -2.02
COL4A5P29400 AC087385.1-201ENST00000475062 312 ntBASIC2.42□□□□□ -2.02
COL4A5P29400 AP000926.1-201ENST00000479573 241 ntBASIC2.42□□□□□ -2.02
COL4A5P29400 AC017007.3-201ENST00000479865 435 ntBASIC2.42□□□□□ -2.02
COL4A5P29400 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.42□□□□□ -2.02
COL4A5P29400 AC093331.1-201ENST00000521474 169 ntBASIC2.42□□□□□ -2.02
COL4A5P29400 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.42□□□□□ -2.02
COL4A5P29400 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.42□□□□□ -2.02
COL4A5P29400 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.42□□□□□ -2.02
COL4A5P29400 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL4A5P29400 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A5P29400 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL4A5P29400 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL4A5P29400 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL4A5P29400 RNA5SP239-201ENST00000410218 129 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A5P29400 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A5P29400 AC009237.8-201ENST00000445492 379 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.41□□□□□ -2.02
COL4A5P29400 AC104629.2-201ENST00000468627 598 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AC010627.1-201ENST00000503819 1294 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.41□□□□□ -2.02
COL4A5P29400 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.41□□□□□ -2.02
COL4A5P29400 AC073387.2-201ENST00000604797 784 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AP004372.1-201ENST00000604842 844 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AC067852.7-201ENST00000623270 535 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL4A5P29400 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL4A5P29400 DEFA7P-201ENST00000382676 285 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AC240504.1-201ENST00000395709 845 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 RNU4-62P-201ENST00000410125 130 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 RPL31P20-201ENST00000449593 360 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.41□□□□□ -2.02
COL4A5P29400 AP000852.1-201ENST00000472460 573 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.41□□□□□ -2.02
COL4A5P29400 AC108120.2-201ENST00000512973 294 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AP000889.2-201ENST00000532684 490 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AC010615.3-201ENST00000597319 394 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 RMST_5.1-201ENST00000618704 126 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AC244517.12-201ENST00000623581 663 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 AC010680.1-201ENST00000590024 3590 ntBASIC2.41□□□□□ -2.02
COL4A5P29400 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
COL4A5P29400 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
COL4A5P29400 XIAPP3-201ENST00000312918 795 ntBASIC2.4□□□□□ -2.03
COL4A5P29400 RNA5SP190-201ENST00000365222 118 ntBASIC2.4□□□□□ -2.03
COL4A5P29400 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
COL4A5P29400 FGF7P8-201ENST00000402994 292 ntBASIC2.4□□□□□ -2.03
COL4A5P29400 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.4□□□□□ -2.03
COL4A5P29400 CEACAMP4-201ENST00000457676 421 ntBASIC2.4□□□□□ -2.03
COL4A5P29400 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A5P29400 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A5P29400 VN1R79P-201ENST00000593540 513 ntBASIC2.4□□□□□ -2.03
COL4A5P29400 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A5P29400 AL359821.1-201ENST00000605519 182 ntBASIC2.4□□□□□ -2.03
COL4A5P29400 AC108479.2-201ENST00000617314 601 ntBASIC2.4□□□□□ -2.03
COL4A5P29400 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.4□□□□□ -2.03
COL4A5P29400 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A5P29400 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A5P29400 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A5P29400 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A5P29400 AL139276.1-201ENST00000311910 1001 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 MIR378A-201ENST00000362177 66 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 AL627390.1-201ENST00000396055 340 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 RPL21P75-201ENST00000396599 483 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 RPL21P1-201ENST00000399532 476 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 RPL21P28-201ENST00000401418 483 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 AL592114.1-201ENST00000403842 483 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 BTF3P4-201ENST00000418852 495 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A5P29400 AL645939.1-201ENST00000453429 797 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.39□□□□□ -2.03
COL4A5P29400 RPL21P16-201ENST00000495531 483 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 AC108078.2-201ENST00000510750 236 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms