Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
POLR2AP24928 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.45□□□□□ -1.7
POLR2AP24928 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
POLR2AP24928 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.45□□□□□ -1.7
POLR2AP24928 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
POLR2AP24928 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.44□□□□□ -1.7
POLR2AP24928 MTCO1P14-201ENST00000441695 1559 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
POLR2AP24928 RNU6-462P-201ENST00000362659 105 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 RNU6-582P-201ENST00000362989 107 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 Y_RNA.279-201ENST00000364763 95 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 RNU5E-5P-201ENST00000365379 116 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 RNU6-452P-201ENST00000384406 107 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 RNU6-1011P-201ENST00000384668 107 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
POLR2AP24928 MIR1302-11-201ENST00000408051 138 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 MIR1302-9-201ENST00000408365 138 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 MIR1302-10-201ENST00000408734 138 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.44□□□□□ -1.7
POLR2AP24928 RNU6-248P-201ENST00000410720 107 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
POLR2AP24928 RPS29P4-201ENST00000414733 161 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 RPL31P61-201ENST00000496160 376 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.44□□□□□ -1.7
POLR2AP24928 AC097462.2-201ENST00000504623 481 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 MTCYBP43-201ENST00000513621 740 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AP001189.2-201ENST00000527320 189 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC100770.1-201ENST00000532310 322 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC024224.1-201ENST00000538284 609 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 AC141257.3-201ENST00000572906 215 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 MIR3682-201ENST00000581338 84 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 MIR4325-201ENST00000583049 90 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.44□□□□□ -1.7
POLR2AP24928 AC245014.2-201ENST00000603689 287 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC246785.4-201ENST00000605374 287 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 MIR1302-2-201ENST00000607096 138 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC091905.1-201ENST00000624400 311 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 ATE1-AS1-202ENST00000636460 506 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
POLR2AP24928 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
POLR2AP24928 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.44□□□□□ -1.7
POLR2AP24928 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
POLR2AP24928 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
POLR2AP24928 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.44□□□□□ -1.7
POLR2AP24928 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
POLR2AP24928 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
POLR2AP24928 U8.3-201ENST00000363321 132 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 RNA5SP88-201ENST00000365560 109 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.44□□□□□ -1.7
POLR2AP24928 ELOCP14-201ENST00000428070 331 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 ATP5JP1-201ENST00000431631 322 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.44□□□□□ -1.7
POLR2AP24928 ELOCP7-201ENST00000439968 331 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 CALM1P1-201ENST00000442082 433 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 MTND6P5-201ENST00000448266 512 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.44□□□□□ -1.7
POLR2AP24928 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 RNA5SP103-201ENST00000459503 118 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 HMGN1P10-201ENST00000474557 553 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC013828.1-201ENST00000481845 158 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 DEFB109F-201ENST00000491870 277 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC093663.1-201ENST00000497190 394 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.44□□□□□ -1.7
POLR2AP24928 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 AP003072.1-201ENST00000531740 145 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.44□□□□□ -1.7
POLR2AP24928 AC009852.2-201ENST00000567898 485 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.44□□□□□ -1.7
POLR2AP24928 AC115621.1-201ENST00000604653 858 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC008277.2-201ENST00000605196 797 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 AC018690.1-201ENST00000608144 626 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 MIR6852-201ENST00000621699 66 ntBASIC4.44□□□□□ -1.7
POLR2AP24928 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.44□□□□□ -1.7
POLR2AP24928 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.44□□□□□ -1.7
POLR2AP24928 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
POLR2AP24928 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
POLR2AP24928 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
POLR2AP24928 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
POLR2AP24928 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
POLR2AP24928 AC005261.2-201ENST00000593427 4258 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 GDI2P1-201ENST00000429312 1336 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 GNG5P1-201ENST00000255500 204 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 RNU4-79P-201ENST00000362764 141 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 Y_RNA.529-201ENST00000384586 119 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 MRPL42P2-201ENST00000403169 426 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 RPS3AP9-201ENST00000417027 792 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 DBIP2-201ENST00000419076 262 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.43□□□□□ -1.7
POLR2AP24928 MTCO2P5-201ENST00000422621 426 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
POLR2AP24928 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 SNORA71B-202ENST00000439232 272 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms