Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VCANP13611 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.98□□□□□ -2.09
VCANP13611 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VCANP13611 OR6C64P-201ENST00000419708 825 ntBASIC1.98□□□□□ -2.09
VCANP13611 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.98□□□□□ -2.09
VCANP13611 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.98□□□□□ -2.09
VCANP13611 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.98□□□□□ -2.09
VCANP13611 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.98□□□□□ -2.09
VCANP13611 AL160237.3-201ENST00000604114 1013 ntBASIC1.98□□□□□ -2.09
VCANP13611 AC002487.1-201ENST00000604565 994 ntBASIC1.98□□□□□ -2.09
VCANP13611 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.98□□□□□ -2.09
VCANP13611 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.98□□□□□ -2.09
VCANP13611 SEPT7P7-201ENST00000420492 1301 ntBASIC1.98□□□□□ -2.09
VCANP13611 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.98□□□□□ -2.09
VCANP13611 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.98□□□□□ -2.09
VCANP13611 AL133216.2-202ENST00000634512 349 ntBASIC1.98□□□□□ -2.09
VCANP13611 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.97□□□□□ -2.09
VCANP13611 AIMP1P1-201ENST00000418670 937 ntBASIC1.97□□□□□ -2.09
VCANP13611 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.97□□□□□ -2.09
VCANP13611 AC244033.1-201ENST00000426826 870 ntBASIC1.97□□□□□ -2.09
VCANP13611 DYNLL1P5-201ENST00000467158 270 ntBASIC1.97□□□□□ -2.09
VCANP13611 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.97□□□□□ -2.09
VCANP13611 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.97□□□□□ -2.09
VCANP13611 AC069234.5-201ENST00000611056 416 ntBASIC1.97□□□□□ -2.09
VCANP13611 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VCANP13611 CKAP2P1-201ENST00000555477 2049 ntBASIC1.97□□□□□ -2.09
VCANP13611 PNPT1P2-201ENST00000456768 2050 ntBASIC1.97□□□□□ -2.09
VCANP13611 RNU6-37P-201ENST00000362692 107 ntBASIC1.97□□□□□ -2.09
VCANP13611 RNU6-11P-201ENST00000364234 107 ntBASIC1.97□□□□□ -2.09
VCANP13611 MIR142-201ENST00000384835 87 ntBASIC1.97□□□□□ -2.09
VCANP13611 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.97□□□□□ -2.09
VCANP13611 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
VCANP13611 RPS27P27-201ENST00000498779 255 ntBASIC1.97□□□□□ -2.09
VCANP13611 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.97□□□□□ -2.09
VCANP13611 NIFKP8-201ENST00000560500 874 ntBASIC1.97□□□□□ -2.09
VCANP13611 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.97□□□□□ -2.09
VCANP13611 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.97□□□□□ -2.09
VCANP13611 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
VCANP13611 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
VCANP13611 SCN1A-220ENST00000641603 12506 ntBASIC1.97□□□□□ -2.09
VCANP13611 AC093010.3-201ENST00000570269 15214 ntBASIC1.97□□□□□ -2.09
VCANP13611 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
VCANP13611 DNAJC19P6-201ENST00000401853 280 ntBASIC1.96□□□□□ -2.09
VCANP13611 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.96□□□□□ -2.09
VCANP13611 AL445669.2-201ENST00000454425 421 ntBASIC1.96□□□□□ -2.09
VCANP13611 FGF7P3-201ENST00000454645 303 ntBASIC1.96□□□□□ -2.09
VCANP13611 IGHV3-76-201ENST00000522465 295 ntBASIC1.96□□□□□ -2.09
VCANP13611 MIR6132-201ENST00000622083 109 ntBASIC1.96□□□□□ -2.09
VCANP13611 AL353748.2-201ENST00000622148 471 ntBASIC1.96□□□□□ -2.09
VCANP13611 CYP3A51P-201ENST00000633513 256 ntBASIC1.96□□□□□ -2.09
VCANP13611 AC008568.2-201ENST00000623862 2313 ntBASIC1.96□□□□□ -2.1
VCANP13611 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.96□□□□□ -2.1
VCANP13611 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.96□□□□□ -2.1
VCANP13611 SET-203ENST00000372688 801 ntTSL 2 BASIC1.96□□□□□ -2.1
VCANP13611 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
VCANP13611 AC005005.2-201ENST00000420779 380 ntBASIC1.96□□□□□ -2.1
VCANP13611 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.96□□□□□ -2.1
VCANP13611 RPL36AP33-201ENST00000450395 310 ntBASIC1.96□□□□□ -2.1
VCANP13611 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.96□□□□□ -2.1
VCANP13611 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.96□□□□□ -2.1
VCANP13611 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.96□□□□□ -2.1
VCANP13611 AL627230.5-201ENST00000619807 58 ntBASIC1.96□□□□□ -2.1
VCANP13611 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
VCANP13611 RNA5SP457-201ENST00000363657 124 ntBASIC1.96□□□□□ -2.1
VCANP13611 RNU6-1223P-201ENST00000517124 104 ntBASIC1.96□□□□□ -2.1
VCANP13611 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.96□□□□□ -2.1
VCANP13611 AC022960.2-201ENST00000616300 666 ntBASIC1.96□□□□□ -2.1
VCANP13611 LINC00901.1-201ENST00000617252 152 ntBASIC1.96□□□□□ -2.1
VCANP13611 AC244517.12-201ENST00000623581 663 ntBASIC1.96□□□□□ -2.1
VCANP13611 MIR7153-201ENST00000637758 57 ntBASIC1.96□□□□□ -2.1
VCANP13611 AC244517.1-201ENST00000606030 2086 ntBASIC1.96□□□□□ -2.1
VCANP13611 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VCANP13611 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
VCANP13611 AC093775.1-201ENST00000624154 1868 ntBASIC1.95□□□□□ -2.1
VCANP13611 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
VCANP13611 SNORA7.1-201ENST00000363750 139 ntBASIC1.95□□□□□ -2.1
VCANP13611 SSXP1-201ENST00000453640 473 ntBASIC1.95□□□□□ -2.1
VCANP13611 BMS1P7-201ENST00000602440 1052 ntBASIC1.95□□□□□ -2.1
VCANP13611 AC068790.3-201ENST00000602988 553 ntBASIC1.95□□□□□ -2.1
VCANP13611 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.95□□□□□ -2.1
VCANP13611 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VCANP13611 SNORA31-201ENST00000362607 130 ntBASIC1.95□□□□□ -2.1
VCANP13611 RNU1-93P-201ENST00000364704 169 ntBASIC1.95□□□□□ -2.1
VCANP13611 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.95□□□□□ -2.1
VCANP13611 ATP5F1P1-201ENST00000433775 569 ntBASIC1.95□□□□□ -2.1
VCANP13611 AL138799.3-201ENST00000438968 350 ntBASIC1.95□□□□□ -2.1
VCANP13611 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.95□□□□□ -2.1
VCANP13611 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VCANP13611 AC005336.3-201ENST00000623833 2679 ntBASIC1.95□□□□□ -2.1
VCANP13611 AC244505.5-201ENST00000443639 207 ntBASIC1.95□□□□□ -2.1
VCANP13611 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.95□□□□□ -2.1
VCANP13611 GLYCAM1-201ENST00000546596 285 ntBASIC1.95□□□□□ -2.1
VCANP13611 AC245036.5-201ENST00000596330 847 ntBASIC1.95□□□□□ -2.1
VCANP13611 AC243773.3-201ENST00000613270 256 ntBASIC1.95□□□□□ -2.1
VCANP13611 AC002076.2-201ENST00000617362 122 ntBASIC1.95□□□□□ -2.1
VCANP13611 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.95□□□□□ -2.1
VCANP13611 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
VCANP13611 DEFB109C-201ENST00000382575 264 ntBASIC1.94□□□□□ -2.1
VCANP13611 DEFB109B-201ENST00000382656 264 ntBASIC1.94□□□□□ -2.1
VCANP13611 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms