Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.75□□□□□ -1.65
COL6A2P12110 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.75□□□□□ -1.65
COL6A2P12110 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.75□□□□□ -1.65
COL6A2P12110 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.75□□□□□ -1.65
COL6A2P12110 RNA5SP455-201ENST00000365190 119 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 MIR514A2-201ENST00000385131 88 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 MIR514A3-201ENST00000385132 88 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 MIR223-201ENST00000385204 110 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AL080315.1-201ENST00000406055 466 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 MIR1302-11-201ENST00000408051 138 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 MIR1302-9-201ENST00000408365 138 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 MIR1302-10-201ENST00000408734 138 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 RNU6-1148P-201ENST00000410992 104 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.75□□□□□ -1.65
COL6A2P12110 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 MRPL50P4-201ENST00000446432 475 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 MTND3P16-201ENST00000452205 344 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 RN7SL30P-201ENST00000488416 306 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 DEFB109F-201ENST00000491870 277 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AC091885.1-201ENST00000506658 268 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 HIGD1AP14-201ENST00000507617 282 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.75□□□□□ -1.65
COL6A2P12110 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.75□□□□□ -1.65
COL6A2P12110 AC017037.2-201ENST00000513850 890 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 SNORD116-26-201ENST00000516006 96 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 RNU7-51P-201ENST00000516560 62 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 RNU6-1314P-201ENST00000517139 104 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.75□□□□□ -1.65
COL6A2P12110 AC092490.3-201ENST00000545370 572 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AC128657.1-201ENST00000549459 145 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AL133153.1-201ENST00000557756 303 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.75□□□□□ -1.65
COL6A2P12110 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
COL6A2P12110 MIR4691-201ENST00000583764 85 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AP001029.3-201ENST00000588063 596 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AC243960.4-201ENST00000600532 288 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AL451044.1-201ENST00000604867 238 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AC021646.1-201ENST00000605469 484 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 MIR1302-2-201ENST00000607096 138 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AL158196.1-201ENST00000616786 434 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.75□□□□□ -1.65
COL6A2P12110 AC005858.4-201ENST00000623191 700 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.75□□□□□ -1.65
COL6A2P12110 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.75□□□□□ -1.65
COL6A2P12110 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.75□□□□□ -1.65
COL6A2P12110 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 AL592437.2-201ENST00000421655 2434 ntBASIC4.75□□□□□ -1.65
COL6A2P12110 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
COL6A2P12110 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL6A2P12110 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
COL6A2P12110 AC109780.1-201ENST00000451768 1344 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 ASNSP3-201ENST00000451989 1306 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.74□□□□□ -1.65
COL6A2P12110 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL6A2P12110 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.74□□□□□ -1.65
COL6A2P12110 MAPK10-303ENST00000641324 3959 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL6A2P12110 PABPC1P7-201ENST00000413177 1513 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RNA5SP28-201ENST00000363841 119 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 Y_RNA.231-201ENST00000364358 102 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RNU6-1078P-201ENST00000364522 103 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL6A2P12110 RNA5SP146-201ENST00000410743 123 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RN7SKP140-201ENST00000411196 284 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 AL645937.1-202ENST00000421799 937 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 AL353678.1-201ENST00000422735 741 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 MTCYBP8-201ENST00000422855 651 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RPS12P5-201ENST00000423449 371 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 DUTP6-201ENST00000425573 462 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.74□□□□□ -1.65
COL6A2P12110 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RPS17P13-201ENST00000448974 407 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RNU7-182P-201ENST00000459009 62 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RPL23AP56-201ENST00000460778 453 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RPL7L1P8-201ENST00000469911 741 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RPL23AP65-201ENST00000475608 468 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 AC005798.1-201ENST00000513715 387 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RNU4-29P-201ENST00000515943 174 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 RNU6-277P-201ENST00000516272 106 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 IGKV2D-36-201ENST00000518643 226 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 HPRT1P3-201ENST00000539521 576 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL6A2P12110 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.74□□□□□ -1.65
COL6A2P12110 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.74□□□□□ -1.65
COL6A2P12110 RPL21P7-201ENST00000557463 483 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 MIR4700-201ENST00000578311 74 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.74□□□□□ -1.65
COL6A2P12110 AC005498.1-201ENST00000592125 465 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.74□□□□□ -1.65
COL6A2P12110 RNU6-89P-201ENST00000606519 100 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms