Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 COL6A4P2-205ENST00000509855 506 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 GMPSP1-201ENST00000514075 579 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 AC023632.1-201ENST00000518463 375 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 DEFB108D-201ENST00000527787 222 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 CR383656.7-201ENST00000548164 174 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 NBEAP1-201ENST00000554452 979 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 NCAPGP2-201ENST00000557911 754 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.68□□□□□ -1.98
UBCP0CG48 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.68□□□□□ -1.98
UBCP0CG48 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.68□□□□□ -1.98
UBCP0CG48 ZNF415P1-201ENST00000582279 1166 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.68□□□□□ -1.98
UBCP0CG48 AC091057.2-201ENST00000602594 792 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 AC013444.2-201ENST00000603317 787 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.68□□□□□ -1.98
UBCP0CG48 CYCSP41-201ENST00000616920 296 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 AC099506.2-201ENST00000623074 221 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 AC027309.3-201ENST00000623419 351 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 MIR622-201ENST00000638396 96 ntBASIC2.68□□□□□ -1.98
UBCP0CG48 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UBCP0CG48 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
UBCP0CG48 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
UBCP0CG48 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.68□□□□□ -1.98
UBCP0CG48 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.68□□□□□ -1.98
UBCP0CG48 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
UBCP0CG48 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBCP0CG48 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
UBCP0CG48 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
UBCP0CG48 SNORA7.4-201ENST00000384249 137 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 MIR490-201ENST00000384865 128 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 RNU2-47P-201ENST00000410649 186 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 MUPP-201ENST00000438111 566 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 AC092393.1-201ENST00000439625 742 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.67□□□□□ -1.98
UBCP0CG48 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBCP0CG48 Z96811.1-201ENST00000445880 108 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 COX6CP18-201ENST00000448769 222 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 CYCSP35-201ENST00000451978 304 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 RN7SL863P-201ENST00000462370 296 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 RN7SL542P-201ENST00000467147 294 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 RPL23AP11-201ENST00000475260 469 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 RN7SL20P-201ENST00000488827 297 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 DYNLL1P6-201ENST00000503440 264 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 COX7A2P2-201ENST00000505291 250 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.67□□□□□ -1.98
UBCP0CG48 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.67□□□□□ -1.98
UBCP0CG48 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.67□□□□□ -1.98
UBCP0CG48 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.67□□□□□ -1.98
UBCP0CG48 MIR3921-201ENST00000577308 85 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 AC015688.2-201ENST00000584523 262 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 AC006130.2-201ENST00000586202 326 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.67□□□□□ -1.98
UBCP0CG48 BNIP3P24-201ENST00000593398 557 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.67□□□□□ -1.98
UBCP0CG48 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.67□□□□□ -1.98
UBCP0CG48 U73023.1-201ENST00000603134 700 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 PRELID3BP8-201ENST00000604148 295 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 AL031176.1-201ENST00000604554 466 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 AL359198.2-201ENST00000611836 194 ntBASIC2.67□□□□□ -1.98
UBCP0CG48 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.67□□□□□ -1.98
UBCP0CG48 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.67□□□□□ -1.98
UBCP0CG48 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBCP0CG48 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.67□□□□□ -1.98
UBCP0CG48 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBCP0CG48 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
UBCP0CG48 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBCP0CG48 AC010680.1-201ENST00000590024 3590 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBCP0CG48 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
UBCP0CG48 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
UBCP0CG48 AL357075.1-201ENST00000404107 726 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.66□□□□□ -1.98
UBCP0CG48 RNA5SP492-201ENST00000411330 114 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AC092638.1-201ENST00000411966 1275 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.66□□□□□ -1.98
UBCP0CG48 RPL36AP36-201ENST00000418616 301 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 BEND7P1-201ENST00000422058 457 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.66□□□□□ -1.98
UBCP0CG48 FO393414.1-201ENST00000428697 1184 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AC024082.2-201ENST00000434771 238 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AC016696.1-201ENST00000446949 318 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 VN1R10P-201ENST00000447106 875 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.66□□□□□ -1.98
UBCP0CG48 AC008155.2-201ENST00000464337 397 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.66□□□□□ -1.98
UBCP0CG48 VN1R104P-201ENST00000505115 1009 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 HSPD1P15-201ENST00000505573 1122 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBCP0CG48 AL359273.1-201ENST00000510918 627 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 RNU6-334P-201ENST00000517072 102 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.66□□□□□ -1.98
UBCP0CG48 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.66□□□□□ -1.98
UBCP0CG48 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.66□□□□□ -1.98
UBCP0CG48 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBCP0CG48 HSPE1P20-201ENST00000538133 289 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.66□□□□□ -1.98
UBCP0CG48 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.66□□□□□ -1.98
UBCP0CG48 AC044913.1-201ENST00000557200 430 ntBASIC2.66□□□□□ -1.98
UBCP0CG48 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.66□□□□□ -1.98
UBCP0CG48 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms