Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FO393414.1-201ENST00000428697 1184 ntBASIC1.21□□□□□ -2.22
APOBP04114 AC093392.2-201ENST00000450682 337 ntBASIC1.21□□□□□ -2.22
APOBP04114 OR52A4P-203ENST00000498233 1014 ntBASIC1.21□□□□□ -2.22
APOBP04114 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.21□□□□□ -2.22
APOBP04114 AC010297.1-201ENST00000623948 149 ntBASIC1.21□□□□□ -2.22
APOBP04114 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.21□□□□□ -2.22
APOBP04114 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.21□□□□□ -2.22
APOBP04114 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
APOBP04114 RNU6-53P-201ENST00000365367 106 ntBASIC1.21□□□□□ -2.22
APOBP04114 RNU2-22P-201ENST00000411266 212 ntBASIC1.21□□□□□ -2.22
APOBP04114 AC013404.1-201ENST00000413068 249 ntBASIC1.21□□□□□ -2.22
APOBP04114 OR4K11P-201ENST00000431829 904 ntBASIC1.21□□□□□ -2.22
APOBP04114 FAM92A1P1-201ENST00000528023 890 ntBASIC1.21□□□□□ -2.22
APOBP04114 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.21□□□□□ -2.22
APOBP04114 AC068790.3-201ENST00000602988 553 ntBASIC1.21□□□□□ -2.22
APOBP04114 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
APOBP04114 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.2□□□□□ -2.22
APOBP04114 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.2□□□□□ -2.22
APOBP04114 POLR2J4-204ENST00000418424 324 ntBASIC1.2□□□□□ -2.22
APOBP04114 MUPP-201ENST00000438111 566 ntBASIC1.2□□□□□ -2.22
APOBP04114 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.2□□□□□ -2.22
APOBP04114 HMGB1P1-201ENST00000522557 636 ntBASIC1.2□□□□□ -2.22
APOBP04114 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
APOBP04114 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
APOBP04114 AC107021.2-201ENST00000567714 2095 ntBASIC1.2□□□□□ -2.22
APOBP04114 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
APOBP04114 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
APOBP04114 POLHP1-201ENST00000411806 470 ntBASIC1.2□□□□□ -2.22
APOBP04114 DPPA2P1-201ENST00000428060 556 ntBASIC1.2□□□□□ -2.22
APOBP04114 AP000852.1-201ENST00000472460 573 ntBASIC1.2□□□□□ -2.22
APOBP04114 SNORA31.11-201ENST00000516528 139 ntBASIC1.2□□□□□ -2.22
APOBP04114 IGHV3-76-201ENST00000522465 295 ntBASIC1.2□□□□□ -2.22
APOBP04114 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.2□□□□□ -2.22
APOBP04114 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.2□□□□□ -2.22
APOBP04114 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
APOBP04114 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.2□□□□□ -2.22
APOBP04114 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.2□□□□□ -2.22
APOBP04114 SNORA51.4-201ENST00000364993 124 ntBASIC1.2□□□□□ -2.22
APOBP04114 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.2□□□□□ -2.22
APOBP04114 MIR1294-201ENST00000408503 142 ntBASIC1.2□□□□□ -2.22
APOBP04114 U3.37-201ENST00000408528 213 ntBASIC1.2□□□□□ -2.22
APOBP04114 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
APOBP04114 AL445685.2-201ENST00000422551 342 ntBASIC1.2□□□□□ -2.22
APOBP04114 AC104332.2-201ENST00000429959 156 ntBASIC1.2□□□□□ -2.22
APOBP04114 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.2□□□□□ -2.22
APOBP04114 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
APOBP04114 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.2□□□□□ -2.22
APOBP04114 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.2□□□□□ -2.22
APOBP04114 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.2□□□□□ -2.22
APOBP04114 MIR7153-201ENST00000637758 57 ntBASIC1.2□□□□□ -2.22
APOBP04114 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.2□□□□□ -2.22
APOBP04114 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
APOBP04114 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
APOBP04114 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
APOBP04114 HMGN2P19-201ENST00000425149 265 ntBASIC1.2□□□□□ -2.22
APOBP04114 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.2□□□□□ -2.22
APOBP04114 RPAP2P1-201ENST00000603626 1168 ntBASIC1.2□□□□□ -2.22
APOBP04114 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
APOBP04114 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.2□□□□□ -2.22
APOBP04114 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.19□□□□□ -2.22
APOBP04114 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.19□□□□□ -2.22
APOBP04114 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.19□□□□□ -2.22
APOBP04114 USP9YP15-201ENST00000442391 422 ntBASIC1.19□□□□□ -2.22
APOBP04114 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.19□□□□□ -2.22
APOBP04114 AL389895.1-201ENST00000554127 252 ntBASIC1.19□□□□□ -2.22
APOBP04114 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.19□□□□□ -2.22
APOBP04114 AC010872.1-201ENST00000624225 675 ntBASIC1.19□□□□□ -2.22
APOBP04114 API5P2-201ENST00000397055 1498 ntBASIC1.19□□□□□ -2.22
APOBP04114 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
APOBP04114 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
APOBP04114 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.19□□□□□ -2.22
APOBP04114 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.19□□□□□ -2.22
APOBP04114 RNA5SP325-201ENST00000363756 130 ntBASIC1.19□□□□□ -2.22
APOBP04114 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.19□□□□□ -2.22
APOBP04114 VN1R31P-201ENST00000417498 730 ntBASIC1.19□□□□□ -2.22
APOBP04114 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.19□□□□□ -2.22
APOBP04114 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.19□□□□□ -2.22
APOBP04114 AC078918.1-201ENST00000498515 228 ntBASIC1.19□□□□□ -2.22
APOBP04114 GOLGA5P1-201ENST00000507317 980 ntBASIC1.19□□□□□ -2.22
APOBP04114 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.19□□□□□ -2.22
APOBP04114 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.19□□□□□ -2.22
APOBP04114 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.19□□□□□ -2.22
APOBP04114 AC002984.1-201ENST00000591692 448 ntBASIC1.19□□□□□ -2.22
APOBP04114 HMGN2P28-201ENST00000606102 262 ntBASIC1.19□□□□□ -2.22
APOBP04114 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.19□□□□□ -2.22
APOBP04114 AC244517.12-201ENST00000623581 663 ntBASIC1.19□□□□□ -2.22
APOBP04114 AC091152.2-201ENST00000591628 2569 ntBASIC1.19□□□□□ -2.22
APOBP04114 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
APOBP04114 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
APOBP04114 MTND5P27-201ENST00000428871 1720 ntBASIC1.19□□□□□ -2.22
APOBP04114 MTND5P35-201ENST00000557537 1720 ntBASIC1.19□□□□□ -2.22
APOBP04114 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.19□□□□□ -2.22
APOBP04114 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
APOBP04114 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
APOBP04114 Y_RNA.354-201ENST00000365448 111 ntBASIC1.19□□□□□ -2.22
APOBP04114 AL591719.1-201ENST00000444669 744 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms