Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC092447.6-201ENST00000414578 210 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.21□□□□□ -1.9
MT-ND1P03886 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.21□□□□□ -1.9
MT-ND1P03886 TIMM9P2-201ENST00000419324 266 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 OR1AA1P-201ENST00000419597 916 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 YPEL5P1-201ENST00000419731 367 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AL049610.1-201ENST00000423374 372 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 MTND5P25-201ENST00000430499 799 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 RPS6P15-201ENST00000431996 751 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 RABEPKP1-201ENST00000440529 1026 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.21□□□□□ -1.9
MT-ND1P03886 VN1R10P-201ENST00000447106 875 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AL445669.2-201ENST00000454425 421 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC092757.1-201ENST00000467293 467 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 RPS23P3-201ENST00000470993 430 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC017015.1-201ENST00000477387 286 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.21□□□□□ -1.9
MT-ND1P03886 KLHL2P1-201ENST00000508691 521 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 MRPS33P3-201ENST00000513456 322 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 OR5AK1P-201ENST00000524837 922 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
MT-ND1P03886 SNRPGP16-201ENST00000533275 226 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.21□□□□□ -1.9
MT-ND1P03886 AL163153.1-201ENST00000554223 283 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.21□□□□□ -1.9
MT-ND1P03886 AC012669.1-201ENST00000603209 283 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 RPL23AP92-201ENST00000603609 255 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC068313.1-201ENST00000604028 1008 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.21□□□□□ -1.9
MT-ND1P03886 AL391497.1-201ENST00000608671 547 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC015967.1-201ENST00000619893 476 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC110801.1-201ENST00000623590 212 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 AC068057.2-201ENST00000624047 895 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.21□□□□□ -1.9
MT-ND1P03886 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MT-ND1P03886 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MT-ND1P03886 AC005539.1-201ENST00000443768 1479 ntBASIC3.21□□□□□ -1.9
MT-ND1P03886 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.21□□□□□ -1.9
MT-ND1P03886 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MT-ND1P03886 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MT-ND1P03886 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MT-ND1P03886 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MT-ND1P03886 AL391994.1-201ENST00000254724 282 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 OR5H2-201ENST00000355273 945 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
MT-ND1P03886 Y_RNA.169-201ENST00000363745 96 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.2□□□□□ -1.9
MT-ND1P03886 U8.11-201ENST00000384699 133 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 U8.12-201ENST00000384701 133 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AC007066.1-201ENST00000392902 381 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 SNRPEP2-201ENST00000397592 279 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 Y_RNA.625-201ENST00000411256 107 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.2□□□□□ -1.9
MT-ND1P03886 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MT-ND1P03886 HMGB3P23-201ENST00000414981 585 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.2□□□□□ -1.9
MT-ND1P03886 AC245291.1-201ENST00000419501 328 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 RPL21P32-201ENST00000419877 477 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.2□□□□□ -1.9
MT-ND1P03886 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.2□□□□□ -1.9
MT-ND1P03886 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.2□□□□□ -1.9
MT-ND1P03886 UBE2D3P1-201ENST00000436669 444 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 YWHAZP7-201ENST00000436906 631 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 MTND5P2-201ENST00000442927 1142 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AL133217.1-201ENST00000450980 425 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AC097262.1-201ENST00000452559 548 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AL109741.2-201ENST00000455561 343 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 RPL23AP31-201ENST00000456160 467 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 U8.18-201ENST00000459285 133 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 RN7SL330P-201ENST00000469709 307 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 RPS3AP22-201ENST00000488297 769 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MT-ND1P03886 HMGN1P11-201ENST00000508668 303 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AC010625.1-201ENST00000511296 403 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.2□□□□□ -1.9
MT-ND1P03886 RNU6-583P-201ENST00000516012 92 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.2□□□□□ -1.9
MT-ND1P03886 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
MT-ND1P03886 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.2□□□□□ -1.9
MT-ND1P03886 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.2□□□□□ -1.9
MT-ND1P03886 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MT-ND1P03886 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.2□□□□□ -1.9
MT-ND1P03886 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.2□□□□□ -1.9
MT-ND1P03886 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.2□□□□□ -1.9
MT-ND1P03886 AL391156.1-201ENST00000554965 554 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.2□□□□□ -1.9
MT-ND1P03886 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.2□□□□□ -1.9
MT-ND1P03886 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms