Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC068587.1-201ENST00000483613 781 ntBASIC3.26□□□□□ -1.89
MBD3O95983 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.26□□□□□ -1.89
MBD3O95983 AP001189.2-201ENST00000527320 189 ntBASIC3.26□□□□□ -1.89
MBD3O95983 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.26□□□□□ -1.89
MBD3O95983 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.26□□□□□ -1.89
MBD3O95983 AP001029.3-201ENST00000588063 596 ntBASIC3.26□□□□□ -1.89
MBD3O95983 AC078899.3-201ENST00000599065 212 ntBASIC3.26□□□□□ -1.89
MBD3O95983 AL390838.2-201ENST00000602394 274 ntBASIC3.26□□□□□ -1.89
MBD3O95983 AC016877.3-201ENST00000606778 504 ntBASIC3.26□□□□□ -1.89
MBD3O95983 AC005046.1-201ENST00000608515 625 ntBASIC3.26□□□□□ -1.89
MBD3O95983 AP001521.1-201ENST00000609150 300 ntBASIC3.26□□□□□ -1.89
MBD3O95983 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
MBD3O95983 AP003122.5-201ENST00000527668 3766 ntBASIC3.26□□□□□ -1.89
MBD3O95983 AL645568.2-201ENST00000432815 1337 ntBASIC3.25□□□□□ -1.89
MBD3O95983 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MBD3O95983 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
MBD3O95983 RNU6-878P-201ENST00000384578 110 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AL354719.1-201ENST00000406535 843 ntBASIC3.25□□□□□ -1.89
MBD3O95983 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD3O95983 RN7SKP220-201ENST00000410611 288 ntBASIC3.25□□□□□ -1.89
MBD3O95983 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD3O95983 YPEL5P1-201ENST00000419731 367 ntBASIC3.25□□□□□ -1.89
MBD3O95983 SEPT7P5-201ENST00000434048 306 ntBASIC3.25□□□□□ -1.89
MBD3O95983 RPL23AP74-201ENST00000437246 471 ntBASIC3.25□□□□□ -1.89
MBD3O95983 USP9YP22-201ENST00000438971 294 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD3O95983 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.25□□□□□ -1.89
MBD3O95983 AC068724.1-201ENST00000487100 792 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.25□□□□□ -1.89
MBD3O95983 PRELID3BP5-201ENST00000508612 460 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AC010625.1-201ENST00000511296 403 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AP003102.1-201ENST00000525638 661 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
MBD3O95983 AC004486.1-201ENST00000546846 233 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AC125611.1-201ENST00000549563 229 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.25□□□□□ -1.89
MBD3O95983 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD3O95983 AC034268.2-201ENST00000571784 482 ntBASIC3.25□□□□□ -1.89
MBD3O95983 MIR3912-201ENST00000577566 105 ntBASIC3.25□□□□□ -1.89
MBD3O95983 MIR3670-2-201ENST00000582974 65 ntBASIC3.25□□□□□ -1.89
MBD3O95983 MIR3670-1-201ENST00000584160 65 ntBASIC3.25□□□□□ -1.89
MBD3O95983 MIR3670-3-201ENST00000584855 65 ntBASIC3.25□□□□□ -1.89
MBD3O95983 BNIP3P24-201ENST00000593398 557 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AC024060.1-201ENST00000607052 494 ntBASIC3.25□□□□□ -1.89
MBD3O95983 MIR3670-4-201ENST00000612260 65 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AC005332.6-201ENST00000613178 446 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AL110115.1-201ENST00000614396 364 ntBASIC3.25□□□□□ -1.89
MBD3O95983 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.25□□□□□ -1.89
MBD3O95983 CR392039.5-201ENST00000623201 510 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AC010872.1-201ENST00000624225 675 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AC091925.2-201ENST00000625059 256 ntBASIC3.25□□□□□ -1.89
MBD3O95983 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
MBD3O95983 AC092593.1-201ENST00000515413 1815 ntBASIC3.25□□□□□ -1.89
MBD3O95983 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
MBD3O95983 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.25□□□□□ -1.89
MBD3O95983 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD3O95983 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MBD3O95983 Z99496.1-201ENST00000469424 1477 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
MBD3O95983 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MBD3O95983 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD3O95983 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
MBD3O95983 RNU6-216P-201ENST00000363282 104 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AL591034.1-201ENST00000407447 340 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MBD3O95983 AL513175.2-201ENST00000422071 443 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.24□□□□□ -1.89
MBD3O95983 DPPA2P1-201ENST00000428060 556 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC091286.1-201ENST00000431233 461 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.24□□□□□ -1.89
MBD3O95983 MTND4LP10-201ENST00000435146 291 ntBASIC3.24□□□□□ -1.89
MBD3O95983 SETP8-201ENST00000435341 628 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC079776.3-201ENST00000450665 370 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AP000705.1-201ENST00000454567 350 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC091153.1-201ENST00000466297 402 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD3O95983 HMGN2P13-201ENST00000476476 274 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC017015.1-201ENST00000477387 286 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC010460.2-201ENST00000509054 677 ntBASIC3.24□□□□□ -1.89
MBD3O95983 MTCYBP16-201ENST00000509187 1129 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.24□□□□□ -1.89
MBD3O95983 RNU6-27P-201ENST00000516146 107 ntBASIC3.24□□□□□ -1.89
MBD3O95983 RNU6-1095P-201ENST00000516148 108 ntBASIC3.24□□□□□ -1.89
MBD3O95983 SNORA31.8-201ENST00000516327 108 ntBASIC3.24□□□□□ -1.89
MBD3O95983 SCARNA13-201ENST00000516672 275 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC104986.1-201ENST00000517978 436 ntBASIC3.24□□□□□ -1.89
MBD3O95983 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD3O95983 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.24□□□□□ -1.89
MBD3O95983 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
MBD3O95983 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.24□□□□□ -1.89
MBD3O95983 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.24□□□□□ -1.89
MBD3O95983 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD3O95983 MIR5708-201ENST00000579723 85 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD3O95983 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.24□□□□□ -1.89
MBD3O95983 AL445435.1-201ENST00000604232 665 ntBASIC3.24□□□□□ -1.89
MBD3O95983 AC069545.1-201ENST00000605671 358 ntBASIC3.24□□□□□ -1.89
MBD3O95983 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.24□□□□□ -1.89
MBD3O95983 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms