Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ERLEC1P1-201ENST00000433806 578 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 NOP56P2-201ENST00000447491 769 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AC009220.1-201ENST00000451614 275 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 MTND3P16-201ENST00000452205 344 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 RPS3AP41-201ENST00000462701 778 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 GMFBP1-201ENST00000467831 427 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AC006512.1-201ENST00000468816 291 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 MTND4P17-201ENST00000470444 350 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AK3P4-201ENST00000504283 583 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 HSPD1P15-201ENST00000505573 1122 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.57□□□□□ -1.68
CNOT4O95628 RNU4-29P-201ENST00000515943 174 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 OR5BN1P-201ENST00000532955 829 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.57□□□□□ -1.68
CNOT4O95628 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.57□□□□□ -1.68
CNOT4O95628 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.57□□□□□ -1.68
CNOT4O95628 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.57□□□□□ -1.68
CNOT4O95628 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.57□□□□□ -1.68
CNOT4O95628 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.57□□□□□ -1.68
CNOT4O95628 AC053481.3-201ENST00000577881 843 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CNOT4O95628 RNU6-89P-201ENST00000606519 100 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AC103710.3-201ENST00000608157 948 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.57□□□□□ -1.68
CNOT4O95628 AL731566.2-201ENST00000618971 317 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNOT4O95628 SCARNA15-201ENST00000607520 4325 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNOT4O95628 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNOT4O95628 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.57□□□□□ -1.68
CNOT4O95628 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNOT4O95628 AC025031.4-201ENST00000621248 3271 ntBASIC4.57□□□□□ -1.68
CNOT4O95628 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNOT4O95628 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CNOT4O95628 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CNOT4O95628 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.56□□□□□ -1.68
CNOT4O95628 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CNOT4O95628 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 SNORA33.2-201ENST00000365413 134 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 RNU4-48P-201ENST00000365559 182 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 OR1L6-202ENST00000373684 1044 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 MIR514A2-201ENST00000385131 88 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 MIR514A3-201ENST00000385132 88 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 RNU4-78P-201ENST00000410940 126 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 RNU6-193P-201ENST00000410977 107 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 HSPE1P1-201ENST00000421494 318 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 BEND7P1-201ENST00000422058 457 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 EI24P4-201ENST00000423683 1078 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.56□□□□□ -1.68
CNOT4O95628 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.56□□□□□ -1.68
CNOT4O95628 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.56□□□□□ -1.68
CNOT4O95628 AC114495.1-201ENST00000441274 436 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 HMGB1P15-201ENST00000453854 435 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 AC090096.1-201ENST00000489168 390 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.56□□□□□ -1.68
CNOT4O95628 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 FRG2DP-202ENST00000566967 323 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 RN7SL290P-201ENST00000578661 300 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 MIR4330-201ENST00000579077 105 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 AC136443.5-201ENST00000603741 370 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 AC011626.1-201ENST00000604710 562 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 AL022345.1-201ENST00000607292 135 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.56□□□□□ -1.68
CNOT4O95628 AC079597.1-201ENST00000624306 508 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.56□□□□□ -1.68
CNOT4O95628 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.56□□□□□ -1.68
CNOT4O95628 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CNOT4O95628 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.56□□□□□ -1.68
CNOT4O95628 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 AC012618.3-205ENST00000637896 1496 ntBASIC4.56□□□□□ -1.68
CNOT4O95628 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNOT4O95628 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNOT4O95628 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNOT4O95628 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
CNOT4O95628 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNOT4O95628 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNOT4O95628 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNOT4O95628 AC097714.1-201ENST00000511272 1647 ntBASIC4.55□□□□□ -1.68
CNOT4O95628 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.55□□□□□ -1.68
CNOT4O95628 XIAPP3-201ENST00000312918 795 ntBASIC4.55□□□□□ -1.68
CNOT4O95628 RNU6-263P-201ENST00000363811 107 ntBASIC4.55□□□□□ -1.68
CNOT4O95628 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNOT4O95628 RNU6-1297P-201ENST00000384415 104 ntBASIC4.55□□□□□ -1.68
CNOT4O95628 RNU6-831P-201ENST00000384548 107 ntBASIC4.55□□□□□ -1.68
CNOT4O95628 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms