Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 MIR6852-201ENST00000621699 66 ntBASIC3.5□□□□□ -1.85
SIX3O95343 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SIX3O95343 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIX3O95343 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIX3O95343 AL035425.3-201ENST00000564206 4996 ntBASIC3.5□□□□□ -1.85
SIX3O95343 AL645937.1-201ENST00000641739 1652 ntBASIC3.49□□□□□ -1.85
SIX3O95343 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SIX3O95343 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIX3O95343 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIX3O95343 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SIX3O95343 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX3O95343 RNU6-289P-201ENST00000364093 107 ntBASIC3.49□□□□□ -1.85
SIX3O95343 SNORA4.1-201ENST00000364263 144 ntBASIC3.49□□□□□ -1.85
SIX3O95343 U8.11-201ENST00000384699 133 ntBASIC3.49□□□□□ -1.85
SIX3O95343 U8.12-201ENST00000384701 133 ntBASIC3.49□□□□□ -1.85
SIX3O95343 MIR135A2-201ENST00000384854 100 ntBASIC3.49□□□□□ -1.85
SIX3O95343 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SIX3O95343 MIR320C1-201ENST00000408566 88 ntBASIC3.49□□□□□ -1.85
SIX3O95343 U3.39-201ENST00000408569 239 ntBASIC3.49□□□□□ -1.85
SIX3O95343 RNU6-757P-201ENST00000410334 100 ntBASIC3.49□□□□□ -1.85
SIX3O95343 RN7SKP53-201ENST00000411337 315 ntBASIC3.49□□□□□ -1.85
SIX3O95343 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX3O95343 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX3O95343 AC024082.2-201ENST00000434771 238 ntBASIC3.49□□□□□ -1.85
SIX3O95343 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX3O95343 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIX3O95343 U8.18-201ENST00000459285 133 ntBASIC3.49□□□□□ -1.85
SIX3O95343 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
SIX3O95343 UBE2DNL-203ENST00000474922 222 ntBASIC3.49□□□□□ -1.85
SIX3O95343 TXNP6-201ENST00000510190 310 ntBASIC3.49□□□□□ -1.85
SIX3O95343 AC024589.1-201ENST00000512207 263 ntBASIC3.49□□□□□ -1.85
SIX3O95343 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX3O95343 AC093677.1-201ENST00000514414 678 ntBASIC3.49□□□□□ -1.85
SIX3O95343 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX3O95343 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.49□□□□□ -1.85
SIX3O95343 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.49□□□□□ -1.85
SIX3O95343 RNU6-579P-201ENST00000516879 102 ntBASIC3.49□□□□□ -1.85
SIX3O95343 PAICSP4-201ENST00000517543 1253 ntBASIC3.49□□□□□ -1.85
SIX3O95343 TRMT10BP1-201ENST00000519377 943 ntBASIC3.49□□□□□ -1.85
SIX3O95343 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX3O95343 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX3O95343 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX3O95343 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.49□□□□□ -1.85
SIX3O95343 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX3O95343 AC061975.8-201ENST00000587058 721 ntBASIC3.49□□□□□ -1.85
SIX3O95343 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX3O95343 AC006539.2-201ENST00000601729 572 ntBASIC3.49□□□□□ -1.85
SIX3O95343 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.49□□□□□ -1.85
SIX3O95343 AC091046.2-201ENST00000620775 665 ntBASIC3.49□□□□□ -1.85
SIX3O95343 AL353748.2-201ENST00000622148 471 ntBASIC3.49□□□□□ -1.85
SIX3O95343 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
SIX3O95343 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIX3O95343 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SIX3O95343 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIX3O95343 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SIX3O95343 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX3O95343 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX3O95343 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX3O95343 Y_RNA.234-201ENST00000364409 97 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AL356421.1-201ENST00000403255 413 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AC096664.2-201ENST00000411843 406 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX3O95343 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AC017083.1-201ENST00000428093 483 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AL158071.1-201ENST00000430315 461 ntBASIC3.48□□□□□ -1.85
SIX3O95343 EZH2P1-201ENST00000431167 291 ntBASIC3.48□□□□□ -1.85
SIX3O95343 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX3O95343 MTND5P14-201ENST00000441481 1267 ntBASIC3.48□□□□□ -1.85
SIX3O95343 RPL17P49-201ENST00000443728 411 ntBASIC3.48□□□□□ -1.85
SIX3O95343 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX3O95343 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.48□□□□□ -1.85
SIX3O95343 RPL31P50-201ENST00000471002 296 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AC108860.1-201ENST00000484521 383 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX3O95343 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX3O95343 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX3O95343 AC026784.1-201ENST00000507986 352 ntBASIC3.48□□□□□ -1.85
SIX3O95343 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX3O95343 AC026801.2-201ENST00000515352 425 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.48□□□□□ -1.85
SIX3O95343 ERHP1-201ENST00000523006 310 ntBASIC3.48□□□□□ -1.85
SIX3O95343 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SIX3O95343 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX3O95343 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX3O95343 AC055876.1-202ENST00000567053 138 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX3O95343 BNIP3P38-201ENST00000601117 544 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AL365503.1-201ENST00000605247 905 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AL592221.1-201ENST00000605266 382 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AC008962.1-201ENST00000605729 304 ntBASIC3.48□□□□□ -1.85
SIX3O95343 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AC022149.2-201ENST00000621061 203 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AL445264.1-201ENST00000621719 171 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AL359757.2-201ENST00000624309 274 ntBASIC3.48□□□□□ -1.85
SIX3O95343 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX3O95343 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX3O95343 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms