Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.15□□□□□ -1.75
MBD4O95243 AL591719.1-201ENST00000444669 744 ntBASIC4.15□□□□□ -1.75
MBD4O95243 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.15□□□□□ -1.75
MBD4O95243 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.15□□□□□ -1.75
MBD4O95243 AC093677.1-201ENST00000514414 678 ntBASIC4.15□□□□□ -1.75
MBD4O95243 RNU2-27P-201ENST00000516185 142 ntBASIC4.15□□□□□ -1.75
MBD4O95243 MRPS36P3-201ENST00000519284 130 ntBASIC4.15□□□□□ -1.75
MBD4O95243 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.15□□□□□ -1.75
MBD4O95243 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.15□□□□□ -1.75
MBD4O95243 AP000926.4-201ENST00000527351 454 ntBASIC4.15□□□□□ -1.75
MBD4O95243 SNRPGP16-201ENST00000533275 226 ntBASIC4.15□□□□□ -1.75
MBD4O95243 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.15□□□□□ -1.75
MBD4O95243 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.15□□□□□ -1.75
MBD4O95243 FAM60BP-201ENST00000578364 658 ntBASIC4.15□□□□□ -1.75
MBD4O95243 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.15□□□□□ -1.75
MBD4O95243 MIR3944-201ENST00000581277 108 ntBASIC4.15□□□□□ -1.75
MBD4O95243 SRGNP1-201ENST00000603392 451 ntBASIC4.15□□□□□ -1.75
MBD4O95243 AL031281.1-201ENST00000604049 488 ntBASIC4.15□□□□□ -1.75
MBD4O95243 ELOCP35-201ENST00000604289 336 ntBASIC4.15□□□□□ -1.75
MBD4O95243 AC012468.1-201ENST00000604888 430 ntBASIC4.15□□□□□ -1.75
MBD4O95243 AL133507.1-201ENST00000605269 557 ntBASIC4.15□□□□□ -1.75
MBD4O95243 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
MBD4O95243 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.15□□□□□ -1.75
MBD4O95243 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
MBD4O95243 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
MBD4O95243 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
MBD4O95243 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MBD4O95243 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MBD4O95243 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD4O95243 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD4O95243 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD4O95243 RNU6-462P-201ENST00000362659 105 ntBASIC4.14□□□□□ -1.75
MBD4O95243 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD4O95243 DEFB109C-201ENST00000382575 264 ntBASIC4.14□□□□□ -1.75
MBD4O95243 DEFB109B-201ENST00000382656 264 ntBASIC4.14□□□□□ -1.75
MBD4O95243 RNVU1-14-201ENST00000384770 164 ntBASIC4.14□□□□□ -1.75
MBD4O95243 AC009237.5-201ENST00000414271 501 ntBASIC4.14□□□□□ -1.75
MBD4O95243 AC079780.1-201ENST00000428259 207 ntBASIC4.14□□□□□ -1.75
MBD4O95243 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD4O95243 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD4O95243 PAXBP1P1-201ENST00000449315 447 ntBASIC4.14□□□□□ -1.75
MBD4O95243 RPL23AP35-201ENST00000451906 501 ntBASIC4.14□□□□□ -1.75
MBD4O95243 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD4O95243 RPL23AP31-201ENST00000456160 467 ntBASIC4.14□□□□□ -1.75
MBD4O95243 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.14□□□□□ -1.75
MBD4O95243 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD4O95243 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD4O95243 RPL7P47-201ENST00000497299 556 ntBASIC4.14□□□□□ -1.75
MBD4O95243 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD4O95243 AC026784.1-201ENST00000507986 352 ntBASIC4.14□□□□□ -1.75
MBD4O95243 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD4O95243 RN7SKP287-201ENST00000516546 266 ntBASIC4.14□□□□□ -1.75
MBD4O95243 IGKV2-26-201ENST00000518305 343 ntBASIC4.14□□□□□ -1.75
MBD4O95243 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD4O95243 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD4O95243 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD4O95243 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD4O95243 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD4O95243 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD4O95243 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD4O95243 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD4O95243 AC093424.1-201ENST00000604999 338 ntBASIC4.14□□□□□ -1.75
MBD4O95243 RNU6-88P-201ENST00000606801 100 ntBASIC4.14□□□□□ -1.75
MBD4O95243 U7.8-201ENST00000619968 63 ntBASIC4.14□□□□□ -1.75
MBD4O95243 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD4O95243 AC008993.2-201ENST00000631744 806 ntBASIC4.14□□□□□ -1.75
MBD4O95243 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
MBD4O95243 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
MBD4O95243 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD4O95243 SGO1P2-201ENST00000429458 1589 ntBASIC4.14□□□□□ -1.75
MBD4O95243 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD4O95243 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
MBD4O95243 MFSD8-233ENST00000641482 4860 ntBASIC4.13□□□□□ -1.75
MBD4O95243 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD4O95243 Y_RNA.234-201ENST00000364409 97 ntBASIC4.13□□□□□ -1.75
MBD4O95243 RNU6-343P-201ENST00000364709 104 ntBASIC4.13□□□□□ -1.75
MBD4O95243 SNORD6-201ENST00000365444 73 ntBASIC4.13□□□□□ -1.75
MBD4O95243 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD4O95243 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD4O95243 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD4O95243 AC004866.2-201ENST00000438285 481 ntBASIC4.13□□□□□ -1.75
MBD4O95243 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD4O95243 EEF1E1P1-201ENST00000446998 430 ntBASIC4.13□□□□□ -1.75
MBD4O95243 AC007967.1-201ENST00000455422 1159 ntBASIC4.13□□□□□ -1.75
MBD4O95243 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD4O95243 snoU13.22-201ENST00000459428 104 ntBASIC4.13□□□□□ -1.75
MBD4O95243 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD4O95243 AC091153.1-201ENST00000466297 402 ntBASIC4.13□□□□□ -1.75
MBD4O95243 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD4O95243 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD4O95243 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.13□□□□□ -1.75
MBD4O95243 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD4O95243 VN1R92P-201ENST00000598511 928 ntBASIC4.13□□□□□ -1.75
MBD4O95243 AC090186.1-201ENST00000605991 572 ntBASIC4.13□□□□□ -1.75
MBD4O95243 AC022149.2-201ENST00000621061 203 ntBASIC4.13□□□□□ -1.75
MBD4O95243 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD4O95243 RPS4XP5-202ENST00000449995 1334 ntBASIC4.13□□□□□ -1.75
MBD4O95243 CEP170P1-201ENST00000502249 4587 ntBASIC4.13□□□□□ -1.75
MBD4O95243 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.13□□□□□ -1.75
MBD4O95243 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms