Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2□□□□□ -2.09
SNRNP200O75643 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2□□□□□ -2.09
SNRNP200O75643 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2□□□□□ -2.09
SNRNP200O75643 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2□□□□□ -2.09
SNRNP200O75643 RPL31P53-201ENST00000457065 348 ntBASIC2□□□□□ -2.09
SNRNP200O75643 AC113398.2-201ENST00000507630 558 ntBASIC2□□□□□ -2.09
SNRNP200O75643 MTND4P2-201ENST00000507767 1203 ntBASIC2□□□□□ -2.09
SNRNP200O75643 MTND4LP24-201ENST00000572277 291 ntBASIC2□□□□□ -2.09
SNRNP200O75643 MIR3124-201ENST00000582636 67 ntBASIC2□□□□□ -2.09
SNRNP200O75643 MIR548Y-201ENST00000582739 110 ntBASIC2□□□□□ -2.09
SNRNP200O75643 SNORD84-203ENST00000584275 78 ntBASIC2□□□□□ -2.09
SNRNP200O75643 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2□□□□□ -2.09
SNRNP200O75643 RBM12B-AS1-201ENST00000623283 653 ntBASIC2□□□□□ -2.09
SNRNP200O75643 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
SNRNP200O75643 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2□□□□□ -2.09
SNRNP200O75643 THUMPD3P1-201ENST00000506556 1480 ntBASIC2□□□□□ -2.09
SNRNP200O75643 NPM1P11-201ENST00000417106 855 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 AC023128.2-201ENST00000420880 1223 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 AC244098.2-201ENST00000422068 99 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 RSL24D1P2-201ENST00000445584 366 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 AC233982.1-201ENST00000451247 436 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 RPS29P12-201ENST00000460178 152 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.99□□□□□ -2.09
SNRNP200O75643 RN7SKP234-201ENST00000517173 224 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.99□□□□□ -2.09
SNRNP200O75643 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.99□□□□□ -2.09
SNRNP200O75643 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.99□□□□□ -2.09
SNRNP200O75643 AC026464.5-201ENST00000562497 722 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 AC012182.1-201ENST00000570133 895 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 NF1P10-201ENST00000613227 742 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.99□□□□□ -2.09
SNRNP200O75643 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.99□□□□□ -2.09
SNRNP200O75643 AC091564.4-201ENST00000533934 2194 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.99□□□□□ -2.09
SNRNP200O75643 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SNRNP200O75643 RNA5SP88-201ENST00000365560 109 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 RPL30P9-201ENST00000465586 330 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 UBL5P3-201ENST00000475112 231 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 MTND3P6-201ENST00000485242 339 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 GZMAP1-201ENST00000503054 631 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 AIG1P1-201ENST00000503376 148 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 RNU1-61P-201ENST00000516107 151 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.99□□□□□ -2.09
SNRNP200O75643 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.99□□□□□ -2.09
SNRNP200O75643 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.99□□□□□ -2.09
SNRNP200O75643 AC135628.1-201ENST00000568867 534 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 AP001029.3-201ENST00000588063 596 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
SNRNP200O75643 FAM60CP-201ENST00000591086 664 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 VN1R78P-201ENST00000597393 564 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.99□□□□□ -2.09
SNRNP200O75643 AC093591.3-201ENST00000634516 308 ntBASIC1.99□□□□□ -2.09
SNRNP200O75643 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.98□□□□□ -2.09
SNRNP200O75643 CKS1BP5-201ENST00000434172 273 ntBASIC1.98□□□□□ -2.09
SNRNP200O75643 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.98□□□□□ -2.09
SNRNP200O75643 RPS26P21-201ENST00000475397 348 ntBASIC1.98□□□□□ -2.09
SNRNP200O75643 YWHAEP4-201ENST00000505390 198 ntBASIC1.98□□□□□ -2.09
SNRNP200O75643 SNORD116-30-201ENST00000516468 85 ntBASIC1.98□□□□□ -2.09
SNRNP200O75643 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.98□□□□□ -2.09
SNRNP200O75643 AC060766.3-201ENST00000591442 263 ntBASIC1.98□□□□□ -2.09
SNRNP200O75643 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.98□□□□□ -2.09
SNRNP200O75643 AL354950.1-201ENST00000614150 568 ntBASIC1.98□□□□□ -2.09
SNRNP200O75643 AC034102.8-201ENST00000615146 484 ntBASIC1.98□□□□□ -2.09
SNRNP200O75643 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.98□□□□□ -2.09
SNRNP200O75643 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNRNP200O75643 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.98□□□□□ -2.09
SNRNP200O75643 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SNRNP200O75643 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP200O75643 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SNRNP200O75643 AC241520.1-201ENST00000422654 1099 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 AC104435.1-201ENST00000483483 166 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP200O75643 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP200O75643 HMGN1P28-201ENST00000521340 364 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.97□□□□□ -2.09
SNRNP200O75643 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP200O75643 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.97□□□□□ -2.09
SNRNP200O75643 DUXAP4-201ENST00000603046 613 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 AC007620.3-201ENST00000608131 497 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP200O75643 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.97□□□□□ -2.09
SNRNP200O75643 ZNF271P-202ENST00000465539 1970 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP200O75643 MTND4P13-201ENST00000402078 1023 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 AL356057.2-201ENST00000403318 432 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP200O75643 RN7SKP284-201ENST00000411002 343 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 RAD23BP2-201ENST00000416003 1207 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 AL591719.1-201ENST00000444669 744 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP200O75643 snoU13.26-201ENST00000459452 105 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP200O75643 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP200O75643 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.97□□□□□ -2.09
SNRNP200O75643 AC087241.2-201ENST00000535801 324 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP200O75643 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP200O75643 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP200O75643 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.97□□□□□ -2.09
SNRNP200O75643 AC020895.1-201ENST00000595362 272 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms