Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC239367.2-201ENST00000447309 705 ntBASIC3.7□□□□□ -1.82
LDB3O75112 WASF1P1-201ENST00000447560 1131 ntBASIC3.7□□□□□ -1.82
LDB3O75112 Z99127.3-201ENST00000448158 395 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB3O75112 AL451050.1-201ENST00000450126 415 ntBASIC3.7□□□□□ -1.82
LDB3O75112 HMGB3P22-202ENST00000451823 572 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AL645939.1-201ENST00000453429 797 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 AL136126.1-201ENST00000473603 402 ntBASIC3.7□□□□□ -1.82
LDB3O75112 S100A11P1-201ENST00000477525 312 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 AC093809.1-201ENST00000509155 340 ntBASIC3.7□□□□□ -1.82
LDB3O75112 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 AC116347.2-201ENST00000514912 523 ntBASIC3.7□□□□□ -1.82
LDB3O75112 RN7SKP298-201ENST00000515950 94 ntBASIC3.7□□□□□ -1.82
LDB3O75112 RNU6-314P-201ENST00000516574 104 ntBASIC3.7□□□□□ -1.82
LDB3O75112 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.7□□□□□ -1.82
LDB3O75112 DEFB108A-201ENST00000530110 222 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AC068587.4-201ENST00000533893 186 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 TOMM20P2-201ENST00000540082 421 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 YPEL5P3-201ENST00000547227 352 ntBASIC3.7□□□□□ -1.82
LDB3O75112 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB3O75112 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB3O75112 AC141257.3-201ENST00000572906 215 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AC103710.4-201ENST00000609301 899 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AC128687.2-201ENST00000609657 566 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AC091834.1-201ENST00000614543 472 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AL139089.1-201ENST00000620372 975 ntBASIC3.7□□□□□ -1.82
LDB3O75112 CYP3A51P-201ENST00000633513 256 ntBASIC3.7□□□□□ -1.82
LDB3O75112 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 AL356489.2-201ENST00000566968 3528 ntBASIC3.7□□□□□ -1.82
LDB3O75112 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB3O75112 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB3O75112 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
LDB3O75112 AL359893.1-201ENST00000447628 1580 ntBASIC3.69□□□□□ -1.82
LDB3O75112 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
LDB3O75112 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
LDB3O75112 RPL23AP57-201ENST00000332361 466 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 RNU6-777P-201ENST00000364265 104 ntBASIC3.69□□□□□ -1.82
LDB3O75112 RNA5SP515-201ENST00000364570 118 ntBASIC3.69□□□□□ -1.82
LDB3O75112 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 SNORA40.3-201ENST00000390964 122 ntBASIC3.69□□□□□ -1.82
LDB3O75112 DHFRP6-201ENST00000401776 268 ntBASIC3.69□□□□□ -1.82
LDB3O75112 RN7SKP56-201ENST00000410513 331 ntBASIC3.69□□□□□ -1.82
LDB3O75112 RN7SKP263-201ENST00000411194 309 ntBASIC3.69□□□□□ -1.82
LDB3O75112 HMGN1P14-201ENST00000412459 517 ntBASIC3.69□□□□□ -1.82
LDB3O75112 RPL17P12-201ENST00000413391 526 ntBASIC3.69□□□□□ -1.82
LDB3O75112 TPMTP2-201ENST00000414372 726 ntBASIC3.69□□□□□ -1.82
LDB3O75112 RPL21P32-201ENST00000419877 477 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AL109913.1-201ENST00000421173 514 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AL356583.2-201ENST00000426536 280 ntBASIC3.69□□□□□ -1.82
LDB3O75112 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB3O75112 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB3O75112 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 AC083863.1-201ENST00000438811 231 ntBASIC3.69□□□□□ -1.82
LDB3O75112 GDI2P2-201ENST00000445131 608 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB3O75112 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 AC098824.1-201ENST00000453565 980 ntBASIC3.69□□□□□ -1.82
LDB3O75112 SNORD42A-201ENST00000459584 64 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC092989.1-201ENST00000481235 277 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC023424.2-201ENST00000493479 777 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC069439.1-201ENST00000494739 167 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 AF131216.2-201ENST00000512316 564 ntBASIC3.69□□□□□ -1.82
LDB3O75112 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDB3O75112 AC005798.1-201ENST00000513715 387 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.69□□□□□ -1.82
LDB3O75112 ADI1P3-201ENST00000549509 470 ntBASIC3.69□□□□□ -1.82
LDB3O75112 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 MIR3160-1-201ENST00000577972 85 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB3O75112 MIR4286-201ENST00000580651 93 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC091135.1-201ENST00000585943 307 ntBASIC3.69□□□□□ -1.82
LDB3O75112 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDB3O75112 RPL23AP92-201ENST00000603609 255 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AL353621.2-201ENST00000605340 133 ntBASIC3.69□□□□□ -1.82
LDB3O75112 AC104010.1-201ENST00000616889 150 ntBASIC3.69□□□□□ -1.82
LDB3O75112 U4.5-201ENST00000617137 123 ntBASIC3.69□□□□□ -1.82
LDB3O75112 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 AC092794.2-201ENST00000620933 563 ntBASIC3.69□□□□□ -1.82
LDB3O75112 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB3O75112 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LDB3O75112 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms