Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.75□□□□□ -1.97
SHOX2O60902 RPS12P2-201ENST00000439728 269 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.75□□□□□ -1.97
SHOX2O60902 RPS23P3-201ENST00000470993 430 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.75□□□□□ -1.97
SHOX2O60902 RPS3AP43-201ENST00000479743 781 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 RPS27P23-201ENST00000487608 251 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.75□□□□□ -1.97
SHOX2O60902 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.75□□□□□ -1.97
SHOX2O60902 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.75□□□□□ -1.97
SHOX2O60902 AC107222.1-201ENST00000510899 637 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 AC103833.1-201ENST00000517442 172 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.75□□□□□ -1.97
SHOX2O60902 HSPE1P20-201ENST00000538133 289 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 AL121603.1-201ENST00000553815 142 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.75□□□□□ -1.97
SHOX2O60902 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.75□□□□□ -1.97
SHOX2O60902 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.75□□□□□ -1.97
SHOX2O60902 AC012254.4-201ENST00000588843 273 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 AC128687.1-201ENST00000605304 619 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.75□□□□□ -1.97
SHOX2O60902 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SHOX2O60902 AC006386.2-201ENST00000624491 75 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 AC012005.1-201ENST00000624575 75 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.75□□□□□ -1.97
SHOX2O60902 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.75□□□□□ -1.97
SHOX2O60902 AC090897.3-201ENST00000636973 1157 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SHOX2O60902 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
SHOX2O60902 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
SHOX2O60902 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.74□□□□□ -1.97
SHOX2O60902 AL645568.2-201ENST00000432815 1337 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SHOX2O60902 MIR449A-201ENST00000362113 91 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 RNA5SP258-201ENST00000362750 119 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 RNU6-7-201ENST00000364784 107 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 RNU6-8-201ENST00000365467 107 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SHOX2O60902 RNU6-441P-201ENST00000384545 106 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 SNORA80E-201ENST00000384744 137 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SHOX2O60902 RPL21P32-201ENST00000419877 477 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.74□□□□□ -1.97
SHOX2O60902 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.74□□□□□ -1.97
SHOX2O60902 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.74□□□□□ -1.97
SHOX2O60902 AL591503.2-201ENST00000442314 1005 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 AC112653.1-201ENST00000443851 386 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SHOX2O60902 AC004022.1-201ENST00000447766 1066 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 CACYBPP2-201ENST00000453625 678 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 AL445669.2-201ENST00000454425 421 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 RPL23AP31-201ENST00000456160 467 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 AC126182.1-201ENST00000478134 357 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 RN7SKP31-201ENST00000516354 278 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.74□□□□□ -1.97
SHOX2O60902 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.74□□□□□ -1.97
SHOX2O60902 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.74□□□□□ -1.97
SHOX2O60902 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.74□□□□□ -1.97
SHOX2O60902 MIR5680-201ENST00000577577 84 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.74□□□□□ -1.97
SHOX2O60902 AC073387.2-201ENST00000604797 784 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 AC016542.1-201ENST00000608259 493 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 AC011890.2-201ENST00000613393 294 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 MIR7112-201ENST00000616126 65 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.74□□□□□ -1.97
SHOX2O60902 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHOX2O60902 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHOX2O60902 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHOX2O60902 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHOX2O60902 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHOX2O60902 MTCO1P6-201ENST00000481192 1384 ntBASIC2.74□□□□□ -1.97
SHOX2O60902 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHOX2O60902 U8.8-201ENST00000365399 135 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.73□□□□□ -1.97
SHOX2O60902 RNA5SP492-201ENST00000411330 114 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 ISCA1P6-201ENST00000427740 390 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 AC005326.1-201ENST00000429197 123 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.73□□□□□ -1.97
SHOX2O60902 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.73□□□□□ -1.97
SHOX2O60902 RABEPKP1-201ENST00000440529 1026 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 AL513321.1-201ENST00000441175 761 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 RAB11AP1-201ENST00000442978 646 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.73□□□□□ -1.97
SHOX2O60902 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.73□□□□□ -1.97
SHOX2O60902 MTND2P6-201ENST00000455337 1030 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 HMGB1P25-201ENST00000468402 607 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.73□□□□□ -1.97
SHOX2O60902 GAPDHP39-201ENST00000481866 979 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 KLHL2P1-201ENST00000508691 521 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 MTCO3P44-201ENST00000510977 541 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.73□□□□□ -1.97
SHOX2O60902 AC091826.1-201ENST00000514065 313 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 RN7SKP272-201ENST00000516988 232 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.73□□□□□ -1.97
SHOX2O60902 AC022784.5-201ENST00000522241 437 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.73□□□□□ -1.97
SHOX2O60902 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.73□□□□□ -1.97
SHOX2O60902 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.73□□□□□ -1.97
SHOX2O60902 CKS1BP1-201ENST00000555221 240 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms