Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 OR5BN1P-201ENST00000532955 829 ntBASIC3.34□□□□□ -1.88
BRD4O60885 AC010615.3-201ENST00000597319 394 ntBASIC3.34□□□□□ -1.88
BRD4O60885 NTAN1P1-201ENST00000603150 646 ntBASIC3.34□□□□□ -1.88
BRD4O60885 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
BRD4O60885 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
BRD4O60885 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BRD4O60885 FRG1BP-201ENST00000278882 761 ntBASIC3.33□□□□□ -1.88
BRD4O60885 AL121972.1-201ENST00000402023 252 ntBASIC3.33□□□□□ -1.88
BRD4O60885 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.33□□□□□ -1.88
BRD4O60885 AC104389.3-201ENST00000445629 235 ntBASIC3.33□□□□□ -1.88
BRD4O60885 RPL21P99-201ENST00000480369 423 ntBASIC3.33□□□□□ -1.88
BRD4O60885 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.33□□□□□ -1.88
BRD4O60885 AC021146.7-201ENST00000509604 775 ntBASIC3.33□□□□□ -1.88
BRD4O60885 IGKV2-36-201ENST00000519999 223 ntBASIC3.33□□□□□ -1.88
BRD4O60885 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.33□□□□□ -1.88
BRD4O60885 EIF4EP5-201ENST00000528228 640 ntBASIC3.33□□□□□ -1.88
BRD4O60885 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.33□□□□□ -1.88
BRD4O60885 MTCO3P24-201ENST00000572729 782 ntBASIC3.33□□□□□ -1.88
BRD4O60885 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.33□□□□□ -1.88
BRD4O60885 AL137246.1-201ENST00000607072 977 ntBASIC3.33□□□□□ -1.88
BRD4O60885 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.33□□□□□ -1.88
BRD4O60885 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
BRD4O60885 AC010297.1-201ENST00000623948 149 ntBASIC3.33□□□□□ -1.88
BRD4O60885 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.33□□□□□ -1.88
BRD4O60885 AC091564.4-201ENST00000533934 2194 ntBASIC3.32□□□□□ -1.88
BRD4O60885 SNORD114-1-201ENST00000362705 72 ntBASIC3.32□□□□□ -1.88
BRD4O60885 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.32□□□□□ -1.88
BRD4O60885 XKRYP6-201ENST00000440468 1116 ntBASIC3.32□□□□□ -1.88
BRD4O60885 XKRYP3-201ENST00000442113 1116 ntBASIC3.32□□□□□ -1.88
BRD4O60885 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.32□□□□□ -1.88
BRD4O60885 AC008571.1-201ENST00000467232 300 ntBASIC3.32□□□□□ -1.88
BRD4O60885 AC022616.2-201ENST00000523185 300 ntBASIC3.32□□□□□ -1.88
BRD4O60885 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.32□□□□□ -1.88
BRD4O60885 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BRD4O60885 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRD4O60885 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.32□□□□□ -1.88
BRD4O60885 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
BRD4O60885 CUL1P1-201ENST00000509510 2425 ntBASIC3.32□□□□□ -1.88
BRD4O60885 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.31□□□□□ -1.88
BRD4O60885 SNORD114-30-201ENST00000364448 72 ntBASIC3.31□□□□□ -1.88
BRD4O60885 U8.8-201ENST00000365399 135 ntBASIC3.31□□□□□ -1.88
BRD4O60885 BTF3P7-201ENST00000407097 488 ntBASIC3.31□□□□□ -1.88
BRD4O60885 AC109780.2-201ENST00000413467 845 ntBASIC3.31□□□□□ -1.88
BRD4O60885 AL158825.1-201ENST00000414735 521 ntBASIC3.31□□□□□ -1.88
BRD4O60885 DPH3P2-201ENST00000422618 250 ntBASIC3.31□□□□□ -1.88
BRD4O60885 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.31□□□□□ -1.88
BRD4O60885 AL392003.1-201ENST00000434394 243 ntBASIC3.31□□□□□ -1.88
BRD4O60885 AC023512.1-201ENST00000444513 499 ntBASIC3.31□□□□□ -1.88
BRD4O60885 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.31□□□□□ -1.88
BRD4O60885 AL445669.2-201ENST00000454425 421 ntBASIC3.31□□□□□ -1.88
BRD4O60885 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.31□□□□□ -1.88
BRD4O60885 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.31□□□□□ -1.88
BRD4O60885 CCNHP1-201ENST00000513311 678 ntBASIC3.31□□□□□ -1.88
BRD4O60885 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.31□□□□□ -1.88
BRD4O60885 RNA5SP458-201ENST00000516188 119 ntBASIC3.31□□□□□ -1.88
BRD4O60885 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.31□□□□□ -1.88
BRD4O60885 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.31□□□□□ -1.88
BRD4O60885 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.31□□□□□ -1.88
BRD4O60885 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BRD4O60885 YWHAZP1-201ENST00000556286 722 ntBASIC3.31□□□□□ -1.88
BRD4O60885 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRD4O60885 AL356575.1-201ENST00000603008 283 ntBASIC3.31□□□□□ -1.88
BRD4O60885 DUXAP4-201ENST00000603046 613 ntBASIC3.31□□□□□ -1.88
BRD4O60885 AC009220.3-201ENST00000604318 586 ntBASIC3.31□□□□□ -1.88
BRD4O60885 HSPA8P4-201ENST00000511877 1920 ntBASIC3.3□□□□□ -1.88
BRD4O60885 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRD4O60885 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BRD4O60885 RNU4-31P-201ENST00000384211 141 ntBASIC3.3□□□□□ -1.88
BRD4O60885 AC007064.1-201ENST00000412238 351 ntBASIC3.3□□□□□ -1.88
BRD4O60885 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.3□□□□□ -1.88
BRD4O60885 AC109583.1-201ENST00000432156 268 ntBASIC3.3□□□□□ -1.88
BRD4O60885 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.3□□□□□ -1.88
BRD4O60885 Z99714.1-201ENST00000450463 807 ntBASIC3.3□□□□□ -1.88
BRD4O60885 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.3□□□□□ -1.88
BRD4O60885 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.3□□□□□ -1.88
BRD4O60885 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.3□□□□□ -1.88
BRD4O60885 AC025281.1-201ENST00000567026 265 ntBASIC3.3□□□□□ -1.88
BRD4O60885 TPMTP1-201ENST00000592307 737 ntBASIC3.3□□□□□ -1.88
BRD4O60885 AC067747.1-201ENST00000608026 250 ntBASIC3.3□□□□□ -1.88
BRD4O60885 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.3□□□□□ -1.88
BRD4O60885 AC026634.1-201ENST00000634369 198 ntBASIC3.3□□□□□ -1.88
BRD4O60885 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.3□□□□□ -1.88
BRD4O60885 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRD4O60885 AC069528.2-201ENST00000624849 1991 ntBASIC3.29□□□□□ -1.88
BRD4O60885 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
BRD4O60885 SNORA41-201ENST00000384675 132 ntBASIC3.29□□□□□ -1.88
BRD4O60885 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRD4O60885 FAT1P1-201ENST00000406588 507 ntBASIC3.29□□□□□ -1.88
BRD4O60885 RNU2-21P-201ENST00000410368 188 ntBASIC3.29□□□□□ -1.88
BRD4O60885 RPL26P37-201ENST00000411983 438 ntBASIC3.29□□□□□ -1.88
BRD4O60885 AL137014.1-201ENST00000420490 1226 ntBASIC3.29□□□□□ -1.88
BRD4O60885 NDUFA5P10-201ENST00000432147 357 ntBASIC3.29□□□□□ -1.88
BRD4O60885 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.29□□□□□ -1.88
BRD4O60885 RPL7P12-201ENST00000446719 750 ntBASIC3.29□□□□□ -1.88
BRD4O60885 GAPDHP39-201ENST00000481866 979 ntBASIC3.29□□□□□ -1.88
BRD4O60885 SNORA31.1-201ENST00000515993 133 ntBASIC3.29□□□□□ -1.88
BRD4O60885 SNORA31.5-201ENST00000516190 133 ntBASIC3.29□□□□□ -1.88
BRD4O60885 AP003467.2-201ENST00000520175 319 ntBASIC3.29□□□□□ -1.88
BRD4O60885 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
BRD4O60885 AP004371.1-201ENST00000525240 214 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms