Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TRIM13O60858 Y_RNA.373-201ENST00000365600 103 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 RNU6-952P-201ENST00000391164 108 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AL049697.2-201ENST00000403708 294 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM13O60858 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AL590609.2-201ENST00000421430 368 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM13O60858 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM13O60858 SDAD1P3-201ENST00000427380 333 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM13O60858 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM13O60858 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM13O60858 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM13O60858 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM13O60858 AC128713.1-201ENST00000471495 306 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 RN7SL97P-201ENST00000486780 299 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 RN7SL558P-201ENST00000497468 299 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM13O60858 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM13O60858 BX510359.5-201ENST00000515651 304 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 SCARNA24.1-201ENST00000516465 137 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 RNA5SP43-201ENST00000516559 110 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 RNU6-1088P-201ENST00000516850 104 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM13O60858 IMMP1LP2-201ENST00000552954 492 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM13O60858 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM13O60858 SULT1C2P1-202ENST00000562418 459 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AC053481.3-201ENST00000577881 843 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM13O60858 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM13O60858 AC233702.9-201ENST00000581528 203 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 MIR5690-201ENST00000583739 73 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AL022099.1-201ENST00000604551 712 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AL592436.1-201ENST00000605135 558 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AC062037.2-201ENST00000610137 73 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AC107871.2-201ENST00000612894 502 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 AC130324.3-201ENST00000614165 542 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.77□□□□□ -1.65
TRIM13O60858 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM13O60858 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM13O60858 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
TRIM13O60858 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM13O60858 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRIM13O60858 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AL672167.1-203ENST00000641299 2975 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRIM13O60858 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TRIM13O60858 Y_RNA.153-201ENST00000363615 91 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 RNU6-38P-201ENST00000384085 107 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 MIR143-201ENST00000385300 106 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
TRIM13O60858 RNA5SP345-201ENST00000410646 108 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 TBCAP2-201ENST00000416175 326 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 RPL7P10-201ENST00000417407 739 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM13O60858 AC009965.2-201ENST00000425328 970 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.76□□□□□ -1.65
TRIM13O60858 AC093151.1-201ENST00000427711 313 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM13O60858 RPS29P14-201ENST00000431518 171 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM13O60858 RPL34P20-201ENST00000442771 351 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM13O60858 AC243772.1-201ENST00000451620 410 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM13O60858 RNU6-333P-201ENST00000459117 107 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 RPS4XP1-201ENST00000482189 787 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AC015911.1-201ENST00000495111 156 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM13O60858 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM13O60858 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM13O60858 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM13O60858 RPL39P5-202ENST00000512505 151 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM13O60858 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM13O60858 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM13O60858 AC107934.1-201ENST00000522215 217 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.76□□□□□ -1.65
TRIM13O60858 COX6CP8-201ENST00000522620 226 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM13O60858 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM13O60858 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM13O60858 AC007375.1-201ENST00000554513 578 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM13O60858 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM13O60858 AC016727.2-201ENST00000603988 621 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AL391813.2-201ENST00000609113 322 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM13O60858 AC007485.1-201ENST00000616755 206 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AC138627.2-201ENST00000624202 601 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM13O60858 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM13O60858 MAPK10-303ENST00000641324 3959 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 AL049641.1-201ENST00000441055 1948 ntBASIC4.76□□□□□ -1.65
TRIM13O60858 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM13O60858 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms