Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SSSCA1O60232 OR56A5-201ENST00000340110 738 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SSSCA1O60232 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SSSCA1O60232 MIR221-201ENST00000385135 110 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 AL121972.1-201ENST00000402023 252 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 AL356967.1-201ENST00000406305 431 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 RNU4-72P-201ENST00000410754 173 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.74□□□□□ -2.13
SSSCA1O60232 AC107083.1-201ENST00000439643 279 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 AL358232.1-201ENST00000448030 501 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.74□□□□□ -2.13
SSSCA1O60232 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.74□□□□□ -2.13
SSSCA1O60232 CAB39P1-201ENST00000502277 460 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.74□□□□□ -2.13
SSSCA1O60232 AC026801.2-201ENST00000515352 425 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 RNU6-319P-201ENST00000516025 108 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 RNA5SP148-201ENST00000516527 94 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 RPS3AP23-202ENST00000574601 686 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 MIR5002-201ENST00000584713 97 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.74□□□□□ -2.13
SSSCA1O60232 AC009570.1-201ENST00000609599 745 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 AC106028.5-201ENST00000610332 395 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SSSCA1O60232 AL133370.2-201ENST00000619934 439 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 AC093591.3-201ENST00000634516 308 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 AC110079.1-202ENST00000635213 138 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SSSCA1O60232 ZNF833P-201ENST00000424938 1494 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 AL359715.4-201ENST00000606629 1436 ntBASIC1.74□□□□□ -2.13
SSSCA1O60232 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
SSSCA1O60232 RNU1-85P-201ENST00000364127 164 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 RNU6-1251P-201ENST00000364502 107 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.73□□□□□ -2.13
SSSCA1O60232 U3.40-201ENST00000408706 208 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 KRR1P1-201ENST00000419430 803 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.73□□□□□ -2.13
SSSCA1O60232 AL590664.1-201ENST00000448065 339 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 snoU13.7-201ENST00000459220 104 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 AC108734.3-201ENST00000481241 1165 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.73□□□□□ -2.13
SSSCA1O60232 RPL7P20-201ENST00000520308 745 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 AC025755.1-201ENST00000521306 278 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.73□□□□□ -2.13
SSSCA1O60232 AC093014.1-201ENST00000548926 724 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SSSCA1O60232 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.73□□□□□ -2.13
SSSCA1O60232 AMZ2P1-203ENST00000565833 850 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 MIR4319-201ENST00000577285 85 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 VN1R92P-201ENST00000598511 928 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 MTCO2P22-201ENST00000603246 681 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 AC096577.2-201ENST00000611455 153 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 VN1R74P-201ENST00000613259 503 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 AL442067.2-201ENST00000614033 363 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.73□□□□□ -2.13
SSSCA1O60232 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SSSCA1O60232 ZNF519P1-201ENST00000449011 1626 ntBASIC1.73□□□□□ -2.13
SSSCA1O60232 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SSSCA1O60232 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.72□□□□□ -2.13
SSSCA1O60232 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.72□□□□□ -2.13
SSSCA1O60232 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
SSSCA1O60232 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.72□□□□□ -2.13
SSSCA1O60232 HSPE1P11-201ENST00000339579 310 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SSSCA1O60232 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.72□□□□□ -2.13
SSSCA1O60232 SNORA6-201ENST00000384033 151 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 SNORA48.3-201ENST00000391081 134 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SSSCA1O60232 AL513331.1-201ENST00000411908 397 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SSSCA1O60232 TRGV7-201ENST00000427089 353 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 AL591719.1-201ENST00000444669 744 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SSSCA1O60232 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.72□□□□□ -2.13
SSSCA1O60232 AL139109.1-201ENST00000455491 297 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 AC079804.2-201ENST00000490376 200 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SSSCA1O60232 RN7SL636P-201ENST00000497504 294 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.72□□□□□ -2.13
SSSCA1O60232 NDUFS5P6-201ENST00000529136 295 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.72□□□□□ -2.13
SSSCA1O60232 HMGB1P6-201ENST00000569046 646 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 RPS15AP11-201ENST00000594193 385 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 AC007179.3-201ENST00000604976 235 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 AL136363.1-201ENST00000605349 337 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 AC245884.12-201ENST00000615364 59 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.72□□□□□ -2.13
SSSCA1O60232 AL031601.2-202ENST00000622650 282 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 AC095031.1-201ENST00000623685 672 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SSSCA1O60232 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.72□□□□□ -2.13
SSSCA1O60232 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.72□□□□□ -2.13
SSSCA1O60232 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
SSSCA1O60232 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
SSSCA1O60232 GNG5P1-201ENST00000255500 204 ntBASIC1.71□□□□□ -2.14
SSSCA1O60232 AC062016.1-201ENST00000355719 319 ntBASIC1.71□□□□□ -2.14
SSSCA1O60232 RNA5SP68-201ENST00000363885 119 ntBASIC1.71□□□□□ -2.14
SSSCA1O60232 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SSSCA1O60232 RNU2-40P-201ENST00000410833 196 ntBASIC1.71□□□□□ -2.14
SSSCA1O60232 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms