Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.29□□□□□ -1.72
PROM1O43490 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 AC104383.1-201ENST00000530297 370 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.29□□□□□ -1.72
PROM1O43490 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
PROM1O43490 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.29□□□□□ -1.72
PROM1O43490 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PROM1O43490 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.29□□□□□ -1.72
PROM1O43490 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PROM1O43490 BPIFA4P-203ENST00000603168 689 ntBASIC4.29□□□□□ -1.72
PROM1O43490 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 MIR6830-201ENST00000636015 70 ntBASIC4.29□□□□□ -1.72
PROM1O43490 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PROM1O43490 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PROM1O43490 CPHL1P-201ENST00000461341 3407 ntBASIC4.29□□□□□ -1.72
PROM1O43490 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.29□□□□□ -1.72
PROM1O43490 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
PROM1O43490 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PROM1O43490 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PROM1O43490 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.29□□□□□ -1.72
PROM1O43490 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PROM1O43490 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PROM1O43490 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.29□□□□□ -1.72
PROM1O43490 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PROM1O43490 AC138915.3-201ENST00000562908 1389 ntBASIC4.28□□□□□ -1.72
PROM1O43490 MTND5P28-201ENST00000438005 1594 ntBASIC4.28□□□□□ -1.72
PROM1O43490 LINC00622-201ENST00000562811 1570 ntBASIC4.28□□□□□ -1.72
PROM1O43490 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.28□□□□□ -1.72
PROM1O43490 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PROM1O43490 Y_RNA.126-201ENST00000363382 111 ntBASIC4.28□□□□□ -1.72
PROM1O43490 RNU6-456P-201ENST00000384493 107 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AL356776.1-201ENST00000406574 447 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AL603766.1-201ENST00000407763 664 ntBASIC4.28□□□□□ -1.72
PROM1O43490 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 RN7SKP177-201ENST00000410567 355 ntBASIC4.28□□□□□ -1.72
PROM1O43490 RN7SKP263-201ENST00000411194 309 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AC078974.1-201ENST00000411597 223 ntBASIC4.28□□□□□ -1.72
PROM1O43490 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 RPS15AP40-201ENST00000419621 391 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AL592293.2-201ENST00000422292 996 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 AC119618.1-201ENST00000434191 222 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.28□□□□□ -1.72
PROM1O43490 RPL7P54-201ENST00000438336 674 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.28□□□□□ -1.72
PROM1O43490 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.28□□□□□ -1.72
PROM1O43490 RPL23AP20-201ENST00000447965 421 ntBASIC4.28□□□□□ -1.72
PROM1O43490 RPL29P29-201ENST00000448725 423 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.28□□□□□ -1.72
PROM1O43490 AC104073.1-201ENST00000451988 151 ntBASIC4.28□□□□□ -1.72
PROM1O43490 MTND1P11-201ENST00000456661 876 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AC087385.1-201ENST00000475062 312 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AP000926.1-201ENST00000479573 241 ntBASIC4.28□□□□□ -1.72
PROM1O43490 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.28□□□□□ -1.72
PROM1O43490 RN7SKP122-201ENST00000515923 296 ntBASIC4.28□□□□□ -1.72
PROM1O43490 RNA5SP154-201ENST00000516193 111 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.28□□□□□ -1.72
PROM1O43490 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.28□□□□□ -1.72
PROM1O43490 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 AP001781.1-201ENST00000530977 207 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.28□□□□□ -1.72
PROM1O43490 AP003034.1-201ENST00000534621 422 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AC024224.1-201ENST00000538284 609 ntBASIC4.28□□□□□ -1.72
PROM1O43490 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.28□□□□□ -1.72
PROM1O43490 AC053481.3-201ENST00000577881 843 ntBASIC4.28□□□□□ -1.72
PROM1O43490 MIR4715-201ENST00000584117 79 ntBASIC4.28□□□□□ -1.72
PROM1O43490 UBE2V2P2-201ENST00000587677 504 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.28□□□□□ -1.72
PROM1O43490 RPL7P50-201ENST00000600588 727 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.28□□□□□ -1.72
PROM1O43490 BX664608.1-201ENST00000610519 487 ntBASIC4.28□□□□□ -1.72
PROM1O43490 AC091905.2-201ENST00000623143 306 ntBASIC4.28□□□□□ -1.72
PROM1O43490 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 DHX40P1-201ENST00000588725 1412 ntBASIC4.28□□□□□ -1.72
PROM1O43490 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PROM1O43490 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PROM1O43490 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
PROM1O43490 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.73
PROM1O43490 AC130650.2-201ENST00000618736 2403 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PROM1O43490 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PROM1O43490 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.27□□□□□ -1.73
PROM1O43490 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.27□□□□□ -1.73
PROM1O43490 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.27□□□□□ -1.73
PROM1O43490 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PROM1O43490 XIAPP3-201ENST00000312918 795 ntBASIC4.27□□□□□ -1.73
PROM1O43490 OR5J1P-201ENST00000313544 939 ntBASIC4.27□□□□□ -1.73
PROM1O43490 RNU5E-1-201ENST00000362477 120 ntBASIC4.27□□□□□ -1.73
PROM1O43490 Y_RNA.481-201ENST00000384373 102 ntBASIC4.27□□□□□ -1.73
PROM1O43490 MIR659-201ENST00000384963 97 ntBASIC4.27□□□□□ -1.73
PROM1O43490 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PROM1O43490 MIR1193-201ENST00000408109 78 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms